Protein–RNA interactions for Protein: Q4FJU9

Tmem40, Transmembrane protein 40, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmem40Q4FJU9 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tmem40Q4FJU9 Atg10-201ENSMUST00000022119 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tmem40Q4FJU9 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Tmem40Q4FJU9 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tmem40Q4FJU9 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tmem40Q4FJU9 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tmem40Q4FJU9 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tmem40Q4FJU9 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Tmem40Q4FJU9 Gm11780-201ENSMUST00000136880 516 ntBASIC13.34□□□□□ -0.27
Tmem40Q4FJU9 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC13.34□□□□□ -0.27
Tmem40Q4FJU9 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC13.34□□□□□ -0.27
Tmem40Q4FJU9 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC13.34□□□□□ -0.27
Tmem40Q4FJU9 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Tmem40Q4FJU9 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tmem40Q4FJU9 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tmem40Q4FJU9 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tmem40Q4FJU9 Hivep3-201ENSMUST00000084306 2973 ntBASIC13.34□□□□□ -0.27
Tmem40Q4FJU9 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tmem40Q4FJU9 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tmem40Q4FJU9 Dancr-204ENSMUST00000132389 2347 ntBASIC13.34□□□□□ -0.27
Tmem40Q4FJU9 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tmem40Q4FJU9 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC13.33□□□□□ -0.27
Tmem40Q4FJU9 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC13.33□□□□□ -0.27
Tmem40Q4FJU9 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Tmem40Q4FJU9 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Tmem40Q4FJU9 Gm7222-201ENSMUST00000117512 906 ntBASIC13.33□□□□□ -0.28
Tmem40Q4FJU9 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Tmem40Q4FJU9 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Tmem40Q4FJU9 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Tmem40Q4FJU9 Gm45683-201ENSMUST00000210825 1247 ntBASIC13.33□□□□□ -0.28
Tmem40Q4FJU9 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Tmem40Q4FJU9 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Tmem40Q4FJU9 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Tmem40Q4FJU9 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC13.33□□□□□ -0.28
Tmem40Q4FJU9 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Tmem40Q4FJU9 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Tmem40Q4FJU9 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Tmem40Q4FJU9 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Tmem40Q4FJU9 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Tmem40Q4FJU9 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Tmem40Q4FJU9 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Tmem40Q4FJU9 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Tmem40Q4FJU9 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Tmem40Q4FJU9 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Tmem40Q4FJU9 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
Tmem40Q4FJU9 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tmem40Q4FJU9 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Tmem40Q4FJU9 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tmem40Q4FJU9 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tmem40Q4FJU9 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tmem40Q4FJU9 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tmem40Q4FJU9 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tmem40Q4FJU9 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tmem40Q4FJU9 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Tmem40Q4FJU9 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC13.32□□□□□ -0.28
Tmem40Q4FJU9 Gm19430-201ENSMUST00000193847 2137 ntBASIC13.32□□□□□ -0.28
Tmem40Q4FJU9 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Tmem40Q4FJU9 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC13.32□□□□□ -0.28
Tmem40Q4FJU9 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Tmem40Q4FJU9 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Tmem40Q4FJU9 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC13.32□□□□□ -0.28
Tmem40Q4FJU9 AC122901.1-201ENSMUST00000214203 1790 ntBASIC13.32□□□□□ -0.28
Tmem40Q4FJU9 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tmem40Q4FJU9 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tmem40Q4FJU9 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC13.32□□□□□ -0.28
Tmem40Q4FJU9 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tmem40Q4FJU9 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Tmem40Q4FJU9 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tmem40Q4FJU9 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tmem40Q4FJU9 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC13.31□□□□□ -0.28
Tmem40Q4FJU9 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tmem40Q4FJU9 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Tmem40Q4FJU9 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tmem40Q4FJU9 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tmem40Q4FJU9 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tmem40Q4FJU9 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tmem40Q4FJU9 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tmem40Q4FJU9 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Tmem40Q4FJU9 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC13.31□□□□□ -0.28
Tmem40Q4FJU9 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC13.31□□□□□ -0.28
Tmem40Q4FJU9 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Tmem40Q4FJU9 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Tmem40Q4FJU9 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Tmem40Q4FJU9 Gm3928-201ENSMUST00000121141 1307 ntBASIC13.31□□□□□ -0.28
Tmem40Q4FJU9 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tmem40Q4FJU9 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC13.31□□□□□ -0.28
Tmem40Q4FJU9 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Tmem40Q4FJU9 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Tmem40Q4FJU9 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tmem40Q4FJU9 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Tmem40Q4FJU9 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC13.3□□□□□ -0.28
Tmem40Q4FJU9 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC13.3□□□□□ -0.28
Tmem40Q4FJU9 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC13.3□□□□□ -0.28
Tmem40Q4FJU9 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Tmem40Q4FJU9 Rbfox2-206ENSMUST00000227314 1810 ntBASIC13.3□□□□□ -0.28
Tmem40Q4FJU9 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Tmem40Q4FJU9 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tmem40Q4FJU9 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tmem40Q4FJU9 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tmem40Q4FJU9 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC13.3□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms