Protein–RNA interactions for Protein: Q3USH1

Fam196a, Protein FAM196A, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam196aQ3USH1 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC15.68■□□□□ 0.1
Fam196aQ3USH1 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Fam196aQ3USH1 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Fam196aQ3USH1 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Fam196aQ3USH1 Gm8410-201ENSMUST00000117225 605 ntBASIC15.68■□□□□ 0.1
Fam196aQ3USH1 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC15.68■□□□□ 0.1
Fam196aQ3USH1 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC15.68■□□□□ 0.1
Fam196aQ3USH1 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Fam196aQ3USH1 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC15.68■□□□□ 0.1
Fam196aQ3USH1 AC125350.2-201ENSMUST00000224737 727 ntBASIC15.68■□□□□ 0.1
Fam196aQ3USH1 CT030684.1-201ENSMUST00000227292 914 ntBASIC15.68■□□□□ 0.1
Fam196aQ3USH1 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Fam196aQ3USH1 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Fam196aQ3USH1 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Fam196aQ3USH1 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Fam196aQ3USH1 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Fam196aQ3USH1 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Fam196aQ3USH1 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Fam196aQ3USH1 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Fam196aQ3USH1 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Fam196aQ3USH1 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Fam196aQ3USH1 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC15.68■□□□□ 0.1
Fam196aQ3USH1 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Fam196aQ3USH1 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Fam196aQ3USH1 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Fam196aQ3USH1 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Fam196aQ3USH1 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Fam196aQ3USH1 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Fam196aQ3USH1 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC15.67■□□□□ 0.1
Fam196aQ3USH1 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Fam196aQ3USH1 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Fam196aQ3USH1 Gm16215-201ENSMUST00000161990 637 ntBASIC15.67■□□□□ 0.1
Fam196aQ3USH1 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Fam196aQ3USH1 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC15.67■□□□□ 0.1
Fam196aQ3USH1 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Fam196aQ3USH1 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC15.67■□□□□ 0.1
Fam196aQ3USH1 Gm44855-201ENSMUST00000205725 362 ntBASIC15.67■□□□□ 0.1
Fam196aQ3USH1 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Fam196aQ3USH1 Gm25857-201ENSMUST00000082788 129 ntBASIC15.67■□□□□ 0.1
Fam196aQ3USH1 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Fam196aQ3USH1 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Fam196aQ3USH1 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Fam196aQ3USH1 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Fam196aQ3USH1 Grk6-207ENSMUST00000225925 2769 ntBASIC15.67■□□□□ 0.1
Fam196aQ3USH1 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Fam196aQ3USH1 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Fam196aQ3USH1 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Fam196aQ3USH1 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Fam196aQ3USH1 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Fam196aQ3USH1 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Fam196aQ3USH1 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Fam196aQ3USH1 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Fam196aQ3USH1 Gm42934-201ENSMUST00000196920 1345 ntBASIC15.67■□□□□ 0.1
Fam196aQ3USH1 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Fam196aQ3USH1 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Fam196aQ3USH1 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Fam196aQ3USH1 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Fam196aQ3USH1 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Fam196aQ3USH1 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Fam196aQ3USH1 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Fam196aQ3USH1 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Fam196aQ3USH1 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Fam196aQ3USH1 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Fam196aQ3USH1 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Fam196aQ3USH1 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Fam196aQ3USH1 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Fam196aQ3USH1 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Fam196aQ3USH1 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC15.66■□□□□ 0.1
Fam196aQ3USH1 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Fam196aQ3USH1 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Fam196aQ3USH1 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Fam196aQ3USH1 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC15.66■□□□□ 0.1
Fam196aQ3USH1 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC15.66■□□□□ 0.1
Fam196aQ3USH1 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC15.66■□□□□ 0.1
Fam196aQ3USH1 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC15.66■□□□□ 0.1
Fam196aQ3USH1 Rbfox2-208ENSMUST00000227930 1218 ntBASIC15.66■□□□□ 0.1
Fam196aQ3USH1 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC15.66■□□□□ 0.1
Fam196aQ3USH1 Gm10154-201ENSMUST00000084445 354 ntBASIC15.66■□□□□ 0.1
Fam196aQ3USH1 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Fam196aQ3USH1 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Fam196aQ3USH1 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
Fam196aQ3USH1 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Fam196aQ3USH1 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Fam196aQ3USH1 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Fam196aQ3USH1 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Fam196aQ3USH1 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Fam196aQ3USH1 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Fam196aQ3USH1 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Fam196aQ3USH1 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Fam196aQ3USH1 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Fam196aQ3USH1 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Fam196aQ3USH1 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Fam196aQ3USH1 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Fam196aQ3USH1 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Fam196aQ3USH1 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Fam196aQ3USH1 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Fam196aQ3USH1 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Fam196aQ3USH1 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC15.65■□□□□ 0.1
Fam196aQ3USH1 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC15.65■□□□□ 0.1
Fam196aQ3USH1 Gm15653-201ENSMUST00000119247 907 ntBASIC15.65■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms