Protein–RNA interactions for Protein: Q3UNC9

Cks1brt, Cyclin-dependent kinases regulatory subunit, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1brtQ3UNC9 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cks1brtQ3UNC9 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cks1brtQ3UNC9 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cks1brtQ3UNC9 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC11.34□□□□□ -0.59
Cks1brtQ3UNC9 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cks1brtQ3UNC9 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Cks1brtQ3UNC9 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cks1brtQ3UNC9 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Cks1brtQ3UNC9 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Cks1brtQ3UNC9 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cks1brtQ3UNC9 Gm45417-201ENSMUST00000209533 758 ntBASIC11.34□□□□□ -0.59
Cks1brtQ3UNC9 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Cks1brtQ3UNC9 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cks1brtQ3UNC9 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cks1brtQ3UNC9 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cks1brtQ3UNC9 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cks1brtQ3UNC9 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Cks1brtQ3UNC9 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Cks1brtQ3UNC9 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Cks1brtQ3UNC9 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC11.34□□□□□ -0.59
Cks1brtQ3UNC9 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cks1brtQ3UNC9 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cks1brtQ3UNC9 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cks1brtQ3UNC9 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cks1brtQ3UNC9 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cks1brtQ3UNC9 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cks1brtQ3UNC9 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cks1brtQ3UNC9 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cks1brtQ3UNC9 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cks1brtQ3UNC9 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC11.33□□□□□ -0.59
Cks1brtQ3UNC9 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.59
Cks1brtQ3UNC9 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.59
Cks1brtQ3UNC9 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cks1brtQ3UNC9 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Cks1brtQ3UNC9 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Cks1brtQ3UNC9 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cks1brtQ3UNC9 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cks1brtQ3UNC9 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC11.33□□□□□ -0.6
Cks1brtQ3UNC9 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Cks1brtQ3UNC9 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cks1brtQ3UNC9 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
Cks1brtQ3UNC9 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC11.33□□□□□ -0.6
Cks1brtQ3UNC9 Wnt10b-205ENSMUST00000226846 1204 ntBASIC11.33□□□□□ -0.6
Cks1brtQ3UNC9 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cks1brtQ3UNC9 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC11.33□□□□□ -0.6
Cks1brtQ3UNC9 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cks1brtQ3UNC9 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC11.33□□□□□ -0.6
Cks1brtQ3UNC9 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Cks1brtQ3UNC9 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC11.33□□□□□ -0.6
Cks1brtQ3UNC9 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC11.33□□□□□ -0.6
Cks1brtQ3UNC9 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC11.33□□□□□ -0.6
Cks1brtQ3UNC9 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cks1brtQ3UNC9 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC11.33□□□□□ -0.6
Cks1brtQ3UNC9 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cks1brtQ3UNC9 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cks1brtQ3UNC9 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Cks1brtQ3UNC9 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cks1brtQ3UNC9 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cks1brtQ3UNC9 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Cks1brtQ3UNC9 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cks1brtQ3UNC9 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC11.33□□□□□ -0.6
Cks1brtQ3UNC9 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC11.33□□□□□ -0.6
Cks1brtQ3UNC9 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC11.33□□□□□ -0.6
Cks1brtQ3UNC9 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cks1brtQ3UNC9 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC11.33□□□□□ -0.6
Cks1brtQ3UNC9 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cks1brtQ3UNC9 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cks1brtQ3UNC9 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cks1brtQ3UNC9 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cks1brtQ3UNC9 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC11.32□□□□□ -0.6
Cks1brtQ3UNC9 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cks1brtQ3UNC9 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cks1brtQ3UNC9 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cks1brtQ3UNC9 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Cks1brtQ3UNC9 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Cks1brtQ3UNC9 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Cks1brtQ3UNC9 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cks1brtQ3UNC9 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC11.32□□□□□ -0.6
Cks1brtQ3UNC9 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cks1brtQ3UNC9 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cks1brtQ3UNC9 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cks1brtQ3UNC9 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cks1brtQ3UNC9 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC11.32□□□□□ -0.6
Cks1brtQ3UNC9 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC11.32□□□□□ -0.6
Cks1brtQ3UNC9 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cks1brtQ3UNC9 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Cks1brtQ3UNC9 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Cks1brtQ3UNC9 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cks1brtQ3UNC9 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Cks1brtQ3UNC9 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Cks1brtQ3UNC9 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cks1brtQ3UNC9 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC11.32□□□□□ -0.6
Cks1brtQ3UNC9 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC11.32□□□□□ -0.6
Cks1brtQ3UNC9 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cks1brtQ3UNC9 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cks1brtQ3UNC9 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC11.32□□□□□ -0.6
Cks1brtQ3UNC9 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cks1brtQ3UNC9 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Cks1brtQ3UNC9 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cks1brtQ3UNC9 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms