Protein–RNA interactions for Protein: Q3TYP4

Tmem88b, Transmembrane protein 88B, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmem88bQ3TYP4 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Tmem88bQ3TYP4 Zkscan3-208ENSMUST00000224820 5398 ntBASIC13.03□□□□□ -0.32
Tmem88bQ3TYP4 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Tmem88bQ3TYP4 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Tmem88bQ3TYP4 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Tmem88bQ3TYP4 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Tmem88bQ3TYP4 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Tmem88bQ3TYP4 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Tmem88bQ3TYP4 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Tmem88bQ3TYP4 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
Tmem88bQ3TYP4 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Tmem88bQ3TYP4 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC13.02□□□□□ -0.32
Tmem88bQ3TYP4 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
Tmem88bQ3TYP4 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC13.02□□□□□ -0.33
Tmem88bQ3TYP4 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC13.02□□□□□ -0.33
Tmem88bQ3TYP4 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC13.02□□□□□ -0.33
Tmem88bQ3TYP4 Mir7036b-201ENSMUST00000184791 63 ntBASIC13.02□□□□□ -0.33
Tmem88bQ3TYP4 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Tmem88bQ3TYP4 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC13.02□□□□□ -0.33
Tmem88bQ3TYP4 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Tmem88bQ3TYP4 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC13.02□□□□□ -0.33
Tmem88bQ3TYP4 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Tmem88bQ3TYP4 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Tmem88bQ3TYP4 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Tmem88bQ3TYP4 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Tmem88bQ3TYP4 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Tmem88bQ3TYP4 CT010478.1-201ENSMUST00000220747 2787 ntBASIC13.02□□□□□ -0.33
Tmem88bQ3TYP4 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Tmem88bQ3TYP4 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Tmem88bQ3TYP4 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Tmem88bQ3TYP4 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Tmem88bQ3TYP4 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Tmem88bQ3TYP4 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tmem88bQ3TYP4 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Tmem88bQ3TYP4 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Tmem88bQ3TYP4 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tmem88bQ3TYP4 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Tmem88bQ3TYP4 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tmem88bQ3TYP4 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC13.01□□□□□ -0.33
Tmem88bQ3TYP4 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tmem88bQ3TYP4 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Tmem88bQ3TYP4 AA543401-201ENSMUST00000164248 1269 ntBASIC13.01□□□□□ -0.33
Tmem88bQ3TYP4 Gm4899-201ENSMUST00000178708 719 ntBASIC13.01□□□□□ -0.33
Tmem88bQ3TYP4 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tmem88bQ3TYP4 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC13.01□□□□□ -0.33
Tmem88bQ3TYP4 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tmem88bQ3TYP4 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC13.01□□□□□ -0.33
Tmem88bQ3TYP4 Gm44492-201ENSMUST00000197012 141 ntBASIC13.01□□□□□ -0.33
Tmem88bQ3TYP4 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC13.01□□□□□ -0.33
Tmem88bQ3TYP4 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC13.01□□□□□ -0.33
Tmem88bQ3TYP4 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tmem88bQ3TYP4 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Tmem88bQ3TYP4 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC13.01□□□□□ -0.33
Tmem88bQ3TYP4 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tmem88bQ3TYP4 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC13.01□□□□□ -0.33
Tmem88bQ3TYP4 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tmem88bQ3TYP4 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tmem88bQ3TYP4 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Tmem88bQ3TYP4 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Tmem88bQ3TYP4 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Tmem88bQ3TYP4 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tmem88bQ3TYP4 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tmem88bQ3TYP4 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tmem88bQ3TYP4 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tmem88bQ3TYP4 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tmem88bQ3TYP4 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tmem88bQ3TYP4 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tmem88bQ3TYP4 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tmem88bQ3TYP4 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tmem88bQ3TYP4 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Tmem88bQ3TYP4 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC13□□□□□ -0.33
Tmem88bQ3TYP4 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC13□□□□□ -0.33
Tmem88bQ3TYP4 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC13□□□□□ -0.33
Tmem88bQ3TYP4 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Tmem88bQ3TYP4 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC13□□□□□ -0.33
Tmem88bQ3TYP4 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Tmem88bQ3TYP4 Dancr-204ENSMUST00000132389 2347 ntBASIC13□□□□□ -0.33
Tmem88bQ3TYP4 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC13□□□□□ -0.33
Tmem88bQ3TYP4 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
Tmem88bQ3TYP4 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC13□□□□□ -0.33
Tmem88bQ3TYP4 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC13□□□□□ -0.33
Tmem88bQ3TYP4 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC13□□□□□ -0.33
Tmem88bQ3TYP4 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Tmem88bQ3TYP4 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Tmem88bQ3TYP4 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Tmem88bQ3TYP4 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Tmem88bQ3TYP4 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Tmem88bQ3TYP4 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Tmem88bQ3TYP4 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC13□□□□□ -0.33
Tmem88bQ3TYP4 Gm13616-201ENSMUST00000120600 222 ntBASIC13□□□□□ -0.33
Tmem88bQ3TYP4 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC13□□□□□ -0.33
Tmem88bQ3TYP4 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC13□□□□□ -0.33
Tmem88bQ3TYP4 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC13□□□□□ -0.33
Tmem88bQ3TYP4 AC117588.1-201ENSMUST00000228510 999 ntBASIC13□□□□□ -0.33
Tmem88bQ3TYP4 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Tmem88bQ3TYP4 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Tmem88bQ3TYP4 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Tmem88bQ3TYP4 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Tmem88bQ3TYP4 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Tmem88bQ3TYP4 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms