Protein–RNA interactions for Protein: Q3TCH7

Cul4a, Cullin-4A, mousemouse

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cul4aQ3TCH7 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cul4aQ3TCH7 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC16.46■□□□□ 0.23
Cul4aQ3TCH7 Gm8258-201ENSMUST00000055593 1449 ntBASIC16.46■□□□□ 0.23
Cul4aQ3TCH7 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC16.46■□□□□ 0.23
Cul4aQ3TCH7 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cul4aQ3TCH7 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cul4aQ3TCH7 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cul4aQ3TCH7 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Cul4aQ3TCH7 Gm45328-201ENSMUST00000210942 917 ntBASIC16.46■□□□□ 0.23
Cul4aQ3TCH7 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Cul4aQ3TCH7 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
Cul4aQ3TCH7 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC16.46■□□□□ 0.23
Cul4aQ3TCH7 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.23
Cul4aQ3TCH7 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cul4aQ3TCH7 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Cul4aQ3TCH7 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC16.46■□□□□ 0.22
Cul4aQ3TCH7 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Cul4aQ3TCH7 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Cul4aQ3TCH7 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cul4aQ3TCH7 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cul4aQ3TCH7 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cul4aQ3TCH7 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Cul4aQ3TCH7 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cul4aQ3TCH7 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Cul4aQ3TCH7 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Cul4aQ3TCH7 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC16.45■□□□□ 0.22
Cul4aQ3TCH7 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cul4aQ3TCH7 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cul4aQ3TCH7 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Cul4aQ3TCH7 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cul4aQ3TCH7 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Cul4aQ3TCH7 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
Cul4aQ3TCH7 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC16.45■□□□□ 0.22
Cul4aQ3TCH7 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC16.45■□□□□ 0.22
Cul4aQ3TCH7 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cul4aQ3TCH7 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cul4aQ3TCH7 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Cul4aQ3TCH7 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cul4aQ3TCH7 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cul4aQ3TCH7 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cul4aQ3TCH7 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cul4aQ3TCH7 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Cul4aQ3TCH7 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Cul4aQ3TCH7 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cul4aQ3TCH7 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cul4aQ3TCH7 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Cul4aQ3TCH7 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cul4aQ3TCH7 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cul4aQ3TCH7 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Cul4aQ3TCH7 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC16.44■□□□□ 0.22
Cul4aQ3TCH7 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cul4aQ3TCH7 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC16.44■□□□□ 0.22
Cul4aQ3TCH7 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cul4aQ3TCH7 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC16.44■□□□□ 0.22
Cul4aQ3TCH7 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Cul4aQ3TCH7 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cul4aQ3TCH7 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cul4aQ3TCH7 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cul4aQ3TCH7 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Cul4aQ3TCH7 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cul4aQ3TCH7 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cul4aQ3TCH7 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cul4aQ3TCH7 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC16.44■□□□□ 0.22
Cul4aQ3TCH7 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
Cul4aQ3TCH7 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
Cul4aQ3TCH7 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cul4aQ3TCH7 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC16.44■□□□□ 0.22
Cul4aQ3TCH7 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC16.44■□□□□ 0.22
Cul4aQ3TCH7 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Cul4aQ3TCH7 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cul4aQ3TCH7 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cul4aQ3TCH7 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC16.44■□□□□ 0.22
Cul4aQ3TCH7 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cul4aQ3TCH7 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cul4aQ3TCH7 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cul4aQ3TCH7 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Cul4aQ3TCH7 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Cul4aQ3TCH7 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
Cul4aQ3TCH7 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Cul4aQ3TCH7 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Cul4aQ3TCH7 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Cul4aQ3TCH7 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Cul4aQ3TCH7 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Cul4aQ3TCH7 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Cul4aQ3TCH7 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC16.44■□□□□ 0.22
Cul4aQ3TCH7 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cul4aQ3TCH7 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC16.44■□□□□ 0.22
Cul4aQ3TCH7 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cul4aQ3TCH7 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Cul4aQ3TCH7 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cul4aQ3TCH7 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cul4aQ3TCH7 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cul4aQ3TCH7 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cul4aQ3TCH7 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cul4aQ3TCH7 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Cul4aQ3TCH7 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC16.43■□□□□ 0.22
Cul4aQ3TCH7 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cul4aQ3TCH7 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cul4aQ3TCH7 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Cul4aQ3TCH7 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms