Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim63Q38HM4 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim63Q38HM4 Gm12620-201ENSMUST00000119791 1986 ntBASIC12.99□□□□□ -0.33
Trim63Q38HM4 Gm12612-201ENSMUST00000140182 1986 ntBASIC12.99□□□□□ -0.33
Trim63Q38HM4 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Trim63Q38HM4 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim63Q38HM4 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC12.99□□□□□ -0.33
Trim63Q38HM4 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim63Q38HM4 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim63Q38HM4 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC12.99□□□□□ -0.33
Trim63Q38HM4 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim63Q38HM4 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Trim63Q38HM4 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trim63Q38HM4 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Trim63Q38HM4 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim63Q38HM4 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trim63Q38HM4 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Trim63Q38HM4 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Trim63Q38HM4 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim63Q38HM4 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Trim63Q38HM4 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim63Q38HM4 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim63Q38HM4 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim63Q38HM4 Gm13034-201ENSMUST00000121342 3177 ntBASIC12.98□□□□□ -0.33
Trim63Q38HM4 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim63Q38HM4 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim63Q38HM4 AL590614.2-201ENSMUST00000225374 1937 ntBASIC12.98□□□□□ -0.33
Trim63Q38HM4 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Trim63Q38HM4 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC12.98□□□□□ -0.33
Trim63Q38HM4 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC12.98□□□□□ -0.33
Trim63Q38HM4 Gm7160-202ENSMUST00000188519 1027 ntBASIC12.98□□□□□ -0.33
Trim63Q38HM4 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim63Q38HM4 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC12.98□□□□□ -0.33
Trim63Q38HM4 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim63Q38HM4 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim63Q38HM4 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim63Q38HM4 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Trim63Q38HM4 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim63Q38HM4 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trim63Q38HM4 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim63Q38HM4 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim63Q38HM4 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trim63Q38HM4 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC12.97□□□□□ -0.33
Trim63Q38HM4 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim63Q38HM4 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim63Q38HM4 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC12.97□□□□□ -0.33
Trim63Q38HM4 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim63Q38HM4 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim63Q38HM4 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim63Q38HM4 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim63Q38HM4 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Trim63Q38HM4 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim63Q38HM4 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trim63Q38HM4 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim63Q38HM4 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trim63Q38HM4 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim63Q38HM4 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Trim63Q38HM4 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim63Q38HM4 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trim63Q38HM4 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC12.97□□□□□ -0.33
Trim63Q38HM4 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC12.97□□□□□ -0.33
Trim63Q38HM4 Spcs1-204ENSMUST00000226782 949 ntBASIC12.97□□□□□ -0.33
Trim63Q38HM4 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim63Q38HM4 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim63Q38HM4 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trim63Q38HM4 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim63Q38HM4 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trim63Q38HM4 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim63Q38HM4 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim63Q38HM4 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trim63Q38HM4 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim63Q38HM4 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim63Q38HM4 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC12.97□□□□□ -0.33
Trim63Q38HM4 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim63Q38HM4 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC12.97□□□□□ -0.33
Trim63Q38HM4 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Trim63Q38HM4 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC12.97□□□□□ -0.33
Trim63Q38HM4 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim63Q38HM4 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim63Q38HM4 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim63Q38HM4 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trim63Q38HM4 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim63Q38HM4 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trim63Q38HM4 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim63Q38HM4 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Trim63Q38HM4 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC12.96□□□□□ -0.33
Trim63Q38HM4 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC12.96□□□□□ -0.33
Trim63Q38HM4 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC12.96□□□□□ -0.33
Trim63Q38HM4 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim63Q38HM4 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC12.96□□□□□ -0.33
Trim63Q38HM4 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim63Q38HM4 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trim63Q38HM4 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC12.96□□□□□ -0.33
Trim63Q38HM4 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim63Q38HM4 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim63Q38HM4 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim63Q38HM4 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trim63Q38HM4 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trim63Q38HM4 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
Trim63Q38HM4 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms