Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC8.25□□□□□ -1.09
Ush2AQ2QI47 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC8.25□□□□□ -1.09
Ush2AQ2QI47 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC8.25□□□□□ -1.09
Ush2AQ2QI47 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Ush2AQ2QI47 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Ush2AQ2QI47 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC8.25□□□□□ -1.09
Ush2AQ2QI47 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC8.25□□□□□ -1.09
Ush2AQ2QI47 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC8.25□□□□□ -1.09
Ush2AQ2QI47 Gm2272-201ENSMUST00000194903 582 ntBASIC8.25□□□□□ -1.09
Ush2AQ2QI47 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Ush2AQ2QI47 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Ush2AQ2QI47 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC8.25□□□□□ -1.09
Ush2AQ2QI47 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Ush2AQ2QI47 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Ush2AQ2QI47 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC8.25□□□□□ -1.09
Ush2AQ2QI47 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC8.25□□□□□ -1.09
Ush2AQ2QI47 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC8.25□□□□□ -1.09
Ush2AQ2QI47 Gm27341-201ENSMUST00000183570 106 ntBASIC8.25□□□□□ -1.09
Ush2AQ2QI47 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC8.25□□□□□ -1.09
Ush2AQ2QI47 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Ush2AQ2QI47 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC8.25□□□□□ -1.09
Ush2AQ2QI47 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Ush2AQ2QI47 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Ush2AQ2QI47 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC8.25□□□□□ -1.09
Ush2AQ2QI47 Gm26083-201ENSMUST00000157904 193 ntBASIC8.25□□□□□ -1.09
Ush2AQ2QI47 Gm43947-201ENSMUST00000203019 959 ntBASIC8.25□□□□□ -1.09
Ush2AQ2QI47 Gm5356-201ENSMUST00000093326 615 ntBASIC8.25□□□□□ -1.09
Ush2AQ2QI47 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Ush2AQ2QI47 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC8.24□□□□□ -1.09
Ush2AQ2QI47 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Ush2AQ2QI47 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC8.24□□□□□ -1.09
Ush2AQ2QI47 Gm29127-201ENSMUST00000188304 517 ntBASIC8.24□□□□□ -1.09
Ush2AQ2QI47 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Ush2AQ2QI47 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Ush2AQ2QI47 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC8.24□□□□□ -1.09
Ush2AQ2QI47 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Ush2AQ2QI47 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC8.24□□□□□ -1.09
Ush2AQ2QI47 Mir692-1-201ENSMUST00000102263 109 ntBASIC8.24□□□□□ -1.09
Ush2AQ2QI47 Mup-ps23-201ENSMUST00000118063 630 ntBASIC8.24□□□□□ -1.09
Ush2AQ2QI47 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Ush2AQ2QI47 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC8.24□□□□□ -1.09
Ush2AQ2QI47 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC8.24□□□□□ -1.09
Ush2AQ2QI47 Ighv8-7-201ENSMUST00000194349 297 ntBASIC8.24□□□□□ -1.09
Ush2AQ2QI47 Gm38158-201ENSMUST00000194617 339 ntBASIC8.24□□□□□ -1.09
Ush2AQ2QI47 Gm9445-201ENSMUST00000207454 1285 ntBASIC8.24□□□□□ -1.09
Ush2AQ2QI47 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Ush2AQ2QI47 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Ush2AQ2QI47 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Ush2AQ2QI47 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC8.24□□□□□ -1.09
Ush2AQ2QI47 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Ush2AQ2QI47 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Ush2AQ2QI47 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Ush2AQ2QI47 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Ush2AQ2QI47 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC8.24□□□□□ -1.09
Ush2AQ2QI47 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Ush2AQ2QI47 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC8.24□□□□□ -1.09
Ush2AQ2QI47 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC8.24□□□□□ -1.09
Ush2AQ2QI47 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC8.24□□□□□ -1.09
Ush2AQ2QI47 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Ush2AQ2QI47 Gm16499-203ENSMUST00000204633 2177 ntBASIC8.24□□□□□ -1.09
Ush2AQ2QI47 AC113441.2-201ENSMUST00000221538 1468 ntBASIC8.24□□□□□ -1.09
Ush2AQ2QI47 Gm12749-201ENSMUST00000122138 1159 ntBASIC8.24□□□□□ -1.09
Ush2AQ2QI47 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Ush2AQ2QI47 Gm9719-201ENSMUST00000162765 543 ntBASIC8.24□□□□□ -1.09
Ush2AQ2QI47 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Ush2AQ2QI47 Hrc-202ENSMUST00000211327 607 ntTSL 5 BASIC8.24□□□□□ -1.09
Ush2AQ2QI47 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Ush2AQ2QI47 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Ush2AQ2QI47 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC8.24□□□□□ -1.09
Ush2AQ2QI47 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC8.24□□□□□ -1.09
Ush2AQ2QI47 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC8.24□□□□□ -1.09
Ush2AQ2QI47 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC8.24□□□□□ -1.09
Ush2AQ2QI47 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Ush2AQ2QI47 Gm27920-201ENSMUST00000183953 96 ntBASIC8.23□□□□□ -1.09
Ush2AQ2QI47 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC8.23□□□□□ -1.09
Ush2AQ2QI47 CT009718.3-201ENSMUST00000221116 367 ntBASIC8.23□□□□□ -1.09
Ush2AQ2QI47 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC8.23□□□□□ -1.09
Ush2AQ2QI47 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC8.23□□□□□ -1.09
Ush2AQ2QI47 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC8.23□□□□□ -1.09
Ush2AQ2QI47 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Ush2AQ2QI47 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Ush2AQ2QI47 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Ush2AQ2QI47 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC8.23□□□□□ -1.09
Ush2AQ2QI47 Gm36967-201ENSMUST00000193814 266 ntBASIC8.23□□□□□ -1.09
Ush2AQ2QI47 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Ush2AQ2QI47 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC8.23□□□□□ -1.09
Ush2AQ2QI47 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC8.23□□□□□ -1.09
Ush2AQ2QI47 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Ush2AQ2QI47 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC8.23□□□□□ -1.09
Ush2AQ2QI47 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Ush2AQ2QI47 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC8.23□□□□□ -1.09
Ush2AQ2QI47 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC8.23□□□□□ -1.09
Ush2AQ2QI47 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Ush2AQ2QI47 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Ush2AQ2QI47 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Ush2AQ2QI47 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Ush2AQ2QI47 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Ush2AQ2QI47 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC8.23□□□□□ -1.09
Ush2AQ2QI47 Cd27-203ENSMUST00000112282 588 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Ush2AQ2QI47 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms