Protein–RNA interactions for Protein: Q09XV5

Chd8, Chromodomain-helicase-DNA-binding protein 8, mousemouse

Known RBP Predictions only

Length 2,582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd8Q09XV5 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC13.96□□□□□ -0.17
Chd8Q09XV5 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Chd8Q09XV5 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Chd8Q09XV5 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Chd8Q09XV5 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
Chd8Q09XV5 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Chd8Q09XV5 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Chd8Q09XV5 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Chd8Q09XV5 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Chd8Q09XV5 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC13.95□□□□□ -0.18
Chd8Q09XV5 D8Ertd738e-201ENSMUST00000019506 616 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
Chd8Q09XV5 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC13.95□□□□□ -0.18
Chd8Q09XV5 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Chd8Q09XV5 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC13.95□□□□□ -0.18
Chd8Q09XV5 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Chd8Q09XV5 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Chd8Q09XV5 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Chd8Q09XV5 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Chd8Q09XV5 AC154276.1-201ENSMUST00000228874 1299 ntBASIC13.95□□□□□ -0.18
Chd8Q09XV5 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Chd8Q09XV5 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC13.95□□□□□ -0.18
Chd8Q09XV5 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Chd8Q09XV5 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Chd8Q09XV5 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Chd8Q09XV5 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Chd8Q09XV5 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Chd8Q09XV5 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Chd8Q09XV5 Gm14662-201ENSMUST00000145552 734 ntTSL 3 BASIC13.94□□□□□ -0.18
Chd8Q09XV5 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Chd8Q09XV5 AC090659.2-201ENSMUST00000225378 1186 ntBASIC13.94□□□□□ -0.18
Chd8Q09XV5 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC13.94□□□□□ -0.18
Chd8Q09XV5 Dmtn-210ENSMUST00000228824 2377 ntBASIC13.94□□□□□ -0.18
Chd8Q09XV5 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Chd8Q09XV5 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Chd8Q09XV5 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Chd8Q09XV5 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Chd8Q09XV5 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Chd8Q09XV5 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Chd8Q09XV5 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Chd8Q09XV5 Gm5320-201ENSMUST00000207163 1519 ntBASIC13.94□□□□□ -0.18
Chd8Q09XV5 Gm5187-201ENSMUST00000117317 991 ntBASIC13.94□□□□□ -0.18
Chd8Q09XV5 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC13.94□□□□□ -0.18
Chd8Q09XV5 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC13.94□□□□□ -0.18
Chd8Q09XV5 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Chd8Q09XV5 Gm17794-201ENSMUST00000220252 955 ntBASIC13.94□□□□□ -0.18
Chd8Q09XV5 AC117588.1-201ENSMUST00000228510 999 ntBASIC13.94□□□□□ -0.18
Chd8Q09XV5 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Chd8Q09XV5 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Chd8Q09XV5 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Chd8Q09XV5 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Chd8Q09XV5 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Chd8Q09XV5 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Chd8Q09XV5 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Chd8Q09XV5 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Chd8Q09XV5 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Chd8Q09XV5 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Chd8Q09XV5 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Chd8Q09XV5 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC13.93□□□□□ -0.18
Chd8Q09XV5 CU024892.2-201ENSMUST00000224608 832 ntBASIC13.93□□□□□ -0.18
Chd8Q09XV5 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Chd8Q09XV5 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Chd8Q09XV5 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC13.93□□□□□ -0.18
Chd8Q09XV5 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Chd8Q09XV5 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Chd8Q09XV5 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Chd8Q09XV5 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Chd8Q09XV5 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC13.93□□□□□ -0.18
Chd8Q09XV5 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC13.93□□□□□ -0.18
Chd8Q09XV5 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC13.93□□□□□ -0.18
Chd8Q09XV5 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Chd8Q09XV5 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC13.93□□□□□ -0.18
Chd8Q09XV5 Gm8565-201ENSMUST00000183259 1014 ntBASIC13.93□□□□□ -0.18
Chd8Q09XV5 AC093022.1-201ENSMUST00000226949 1072 ntBASIC13.93□□□□□ -0.18
Chd8Q09XV5 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Chd8Q09XV5 Gm5898-201ENSMUST00000121016 2071 ntBASIC13.93□□□□□ -0.18
Chd8Q09XV5 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Chd8Q09XV5 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Chd8Q09XV5 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Chd8Q09XV5 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Chd8Q09XV5 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Chd8Q09XV5 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Chd8Q09XV5 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Chd8Q09XV5 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Chd8Q09XV5 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Chd8Q09XV5 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Chd8Q09XV5 Gm43006-201ENSMUST00000197702 1602 ntBASIC13.92□□□□□ -0.18
Chd8Q09XV5 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Chd8Q09XV5 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC13.92□□□□□ -0.18
Chd8Q09XV5 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Chd8Q09XV5 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Chd8Q09XV5 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Chd8Q09XV5 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Chd8Q09XV5 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Chd8Q09XV5 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Chd8Q09XV5 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Chd8Q09XV5 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC13.92□□□□□ -0.18
Chd8Q09XV5 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Chd8Q09XV5 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC13.92□□□□□ -0.18
Chd8Q09XV5 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Chd8Q09XV5 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms