Protein–RNA interactions for Protein: P97952

Scn1b, Sodium channel subunit beta-1, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1bP97952 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Scn1bP97952 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Scn1bP97952 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Scn1bP97952 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Scn1bP97952 Gm12085-201ENSMUST00000119263 940 ntBASIC14.37□□□□□ -0.11
Scn1bP97952 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC14.37□□□□□ -0.11
Scn1bP97952 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC14.37□□□□□ -0.11
Scn1bP97952 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Scn1bP97952 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Scn1bP97952 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Scn1bP97952 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Scn1bP97952 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Scn1bP97952 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Scn1bP97952 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Scn1bP97952 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Scn1bP97952 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Scn1bP97952 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC14.37□□□□□ -0.11
Scn1bP97952 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Scn1bP97952 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Scn1bP97952 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Scn1bP97952 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Scn1bP97952 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Scn1bP97952 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Scn1bP97952 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Scn1bP97952 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Scn1bP97952 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Scn1bP97952 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Scn1bP97952 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC14.36□□□□□ -0.11
Scn1bP97952 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
Scn1bP97952 Gm20760-201ENSMUST00000179197 648 ntBASIC14.36□□□□□ -0.11
Scn1bP97952 Gm10698-201ENSMUST00000182663 604 ntBASIC14.36□□□□□ -0.11
Scn1bP97952 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC14.36□□□□□ -0.11
Scn1bP97952 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Scn1bP97952 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Scn1bP97952 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Scn1bP97952 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Scn1bP97952 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Scn1bP97952 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Scn1bP97952 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Scn1bP97952 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Scn1bP97952 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Scn1bP97952 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Scn1bP97952 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Scn1bP97952 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Scn1bP97952 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
Scn1bP97952 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC14.35□□□□□ -0.11
Scn1bP97952 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Scn1bP97952 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
Scn1bP97952 Gm38327-201ENSMUST00000195852 1755 ntBASIC14.35□□□□□ -0.11
Scn1bP97952 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Scn1bP97952 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Scn1bP97952 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Scn1bP97952 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Scn1bP97952 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Scn1bP97952 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Scn1bP97952 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Scn1bP97952 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Scn1bP97952 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Scn1bP97952 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Scn1bP97952 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Scn1bP97952 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Scn1bP97952 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Scn1bP97952 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Scn1bP97952 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC14.34□□□□□ -0.11
Scn1bP97952 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Scn1bP97952 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Scn1bP97952 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Scn1bP97952 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Scn1bP97952 Gm14464-201ENSMUST00000119658 1254 ntBASIC14.34□□□□□ -0.11
Scn1bP97952 Gm13168-201ENSMUST00000121771 632 ntBASIC14.34□□□□□ -0.11
Scn1bP97952 Gm12669-201ENSMUST00000122162 1009 ntBASIC14.34□□□□□ -0.11
Scn1bP97952 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC14.34□□□□□ -0.11
Scn1bP97952 Gm5297-201ENSMUST00000198555 1171 ntBASIC14.34□□□□□ -0.11
Scn1bP97952 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Scn1bP97952 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Scn1bP97952 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Scn1bP97952 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Scn1bP97952 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Scn1bP97952 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Scn1bP97952 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Scn1bP97952 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Scn1bP97952 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Scn1bP97952 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Scn1bP97952 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Scn1bP97952 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Scn1bP97952 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
Scn1bP97952 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Scn1bP97952 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC14.34□□□□□ -0.11
Scn1bP97952 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Scn1bP97952 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Scn1bP97952 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Scn1bP97952 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Scn1bP97952 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC14.33□□□□□ -0.11
Scn1bP97952 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Scn1bP97952 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC14.33□□□□□ -0.11
Scn1bP97952 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Scn1bP97952 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Scn1bP97952 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Scn1bP97952 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Scn1bP97952 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 59.6 ms