Protein–RNA interactions for Protein: P97770

Thumpd3, THUMP domain-containing protein 3, mousemouse

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd3P97770 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Thumpd3P97770 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Thumpd3P97770 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
Thumpd3P97770 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Thumpd3P97770 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Thumpd3P97770 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC16■□□□□ 0.15
Thumpd3P97770 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
Thumpd3P97770 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Thumpd3P97770 AC154412.1-201ENSMUST00000226540 2786 ntBASIC15.99■□□□□ 0.15
Thumpd3P97770 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Thumpd3P97770 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Thumpd3P97770 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Thumpd3P97770 Gm11860-201ENSMUST00000122346 1010 ntBASIC15.99■□□□□ 0.15
Thumpd3P97770 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC15.99■□□□□ 0.15
Thumpd3P97770 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC15.99■□□□□ 0.15
Thumpd3P97770 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC15.99■□□□□ 0.15
Thumpd3P97770 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC15.99■□□□□ 0.15
Thumpd3P97770 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Thumpd3P97770 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Thumpd3P97770 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Thumpd3P97770 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Thumpd3P97770 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
Thumpd3P97770 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC15.99■□□□□ 0.15
Thumpd3P97770 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Thumpd3P97770 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
Thumpd3P97770 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC15.99■□□□□ 0.15
Thumpd3P97770 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Thumpd3P97770 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Thumpd3P97770 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Thumpd3P97770 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Thumpd3P97770 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Thumpd3P97770 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Thumpd3P97770 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Thumpd3P97770 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
Thumpd3P97770 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Thumpd3P97770 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Thumpd3P97770 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC15.98■□□□□ 0.15
Thumpd3P97770 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Thumpd3P97770 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Thumpd3P97770 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Thumpd3P97770 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Thumpd3P97770 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Thumpd3P97770 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC15.98■□□□□ 0.15
Thumpd3P97770 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Thumpd3P97770 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC15.98■□□□□ 0.15
Thumpd3P97770 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC15.98■□□□□ 0.15
Thumpd3P97770 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC15.98■□□□□ 0.15
Thumpd3P97770 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
Thumpd3P97770 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Thumpd3P97770 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Thumpd3P97770 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Thumpd3P97770 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Thumpd3P97770 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC15.98■□□□□ 0.15
Thumpd3P97770 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC15.98■□□□□ 0.15
Thumpd3P97770 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC15.98■□□□□ 0.15
Thumpd3P97770 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Thumpd3P97770 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Thumpd3P97770 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Thumpd3P97770 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Thumpd3P97770 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC15.98■□□□□ 0.15
Thumpd3P97770 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Thumpd3P97770 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Thumpd3P97770 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Thumpd3P97770 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Thumpd3P97770 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
Thumpd3P97770 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC15.97■□□□□ 0.15
Thumpd3P97770 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Thumpd3P97770 Rbfox2-206ENSMUST00000227314 1810 ntBASIC15.97■□□□□ 0.15
Thumpd3P97770 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Thumpd3P97770 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC15.97■□□□□ 0.15
Thumpd3P97770 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC15.97■□□□□ 0.15
Thumpd3P97770 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Thumpd3P97770 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Thumpd3P97770 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Thumpd3P97770 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Thumpd3P97770 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Thumpd3P97770 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Thumpd3P97770 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Thumpd3P97770 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC15.97■□□□□ 0.15
Thumpd3P97770 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Thumpd3P97770 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Thumpd3P97770 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Thumpd3P97770 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Thumpd3P97770 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Thumpd3P97770 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
Thumpd3P97770 Asic1-205ENSMUST00000228185 1818 ntBASIC15.96■□□□□ 0.15
Thumpd3P97770 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Thumpd3P97770 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC15.96■□□□□ 0.15
Thumpd3P97770 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Thumpd3P97770 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Thumpd3P97770 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Thumpd3P97770 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Thumpd3P97770 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC15.96■□□□□ 0.15
Thumpd3P97770 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Thumpd3P97770 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Thumpd3P97770 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC15.96■□□□□ 0.15
Thumpd3P97770 Gm11336-201ENSMUST00000118168 334 ntBASIC15.96■□□□□ 0.15
Thumpd3P97770 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC15.96■□□□□ 0.15
Thumpd3P97770 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Thumpd3P97770 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms