Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC14.8□□□□□ -0.04
Nkx3-2P97503 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC14.8□□□□□ -0.04
Nkx3-2P97503 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nkx3-2P97503 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nkx3-2P97503 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nkx3-2P97503 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nkx3-2P97503 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC14.8□□□□□ -0.04
Nkx3-2P97503 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Nkx3-2P97503 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC14.8□□□□□ -0.04
Nkx3-2P97503 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nkx3-2P97503 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nkx3-2P97503 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nkx3-2P97503 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Nkx3-2P97503 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nkx3-2P97503 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC14.79□□□□□ -0.04
Nkx3-2P97503 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC14.79□□□□□ -0.04
Nkx3-2P97503 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nkx3-2P97503 Gm1401-201ENSMUST00000122048 772 ntBASIC14.79□□□□□ -0.04
Nkx3-2P97503 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nkx3-2P97503 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nkx3-2P97503 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nkx3-2P97503 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nkx3-2P97503 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nkx3-2P97503 Mir5131-201ENSMUST00000175426 93 ntBASIC14.79□□□□□ -0.04
Nkx3-2P97503 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC14.79□□□□□ -0.04
Nkx3-2P97503 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Nkx3-2P97503 Gm6089-201ENSMUST00000197666 938 ntBASIC14.79□□□□□ -0.04
Nkx3-2P97503 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nkx3-2P97503 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nkx3-2P97503 AC138767.1-201ENSMUST00000222661 415 ntBASIC14.79□□□□□ -0.04
Nkx3-2P97503 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC14.79□□□□□ -0.04
Nkx3-2P97503 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nkx3-2P97503 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nkx3-2P97503 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nkx3-2P97503 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nkx3-2P97503 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nkx3-2P97503 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC14.79□□□□□ -0.04
Nkx3-2P97503 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC14.79□□□□□ -0.04
Nkx3-2P97503 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Nkx3-2P97503 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nkx3-2P97503 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nkx3-2P97503 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nkx3-2P97503 AC093043.3-201ENSMUST00000226531 2273 ntBASIC14.78□□□□□ -0.04
Nkx3-2P97503 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC14.78□□□□□ -0.04
Nkx3-2P97503 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Nkx3-2P97503 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nkx3-2P97503 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC14.78□□□□□ -0.04
Nkx3-2P97503 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nkx3-2P97503 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Nkx3-2P97503 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nkx3-2P97503 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Nkx3-2P97503 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Nkx3-2P97503 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Nkx3-2P97503 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC14.78□□□□□ -0.04
Nkx3-2P97503 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Nkx3-2P97503 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Nkx3-2P97503 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nkx3-2P97503 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Nkx3-2P97503 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Nkx3-2P97503 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC14.78□□□□□ -0.04
Nkx3-2P97503 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC14.78□□□□□ -0.04
Nkx3-2P97503 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nkx3-2P97503 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nkx3-2P97503 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nkx3-2P97503 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nkx3-2P97503 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Nkx3-2P97503 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nkx3-2P97503 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
Nkx3-2P97503 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nkx3-2P97503 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nkx3-2P97503 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC14.78□□□□□ -0.04
Nkx3-2P97503 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Nkx3-2P97503 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nkx3-2P97503 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Nkx3-2P97503 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nkx3-2P97503 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC14.78□□□□□ -0.04
Nkx3-2P97503 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Nkx3-2P97503 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Nkx3-2P97503 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Nkx3-2P97503 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Nkx3-2P97503 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Nkx3-2P97503 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Nkx3-2P97503 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC14.77□□□□□ -0.04
Nkx3-2P97503 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Nkx3-2P97503 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Nkx3-2P97503 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Nkx3-2P97503 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
Nkx3-2P97503 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Nkx3-2P97503 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC14.77□□□□□ -0.05
Nkx3-2P97503 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC14.77□□□□□ -0.05
Nkx3-2P97503 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC14.77□□□□□ -0.05
Nkx3-2P97503 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
Nkx3-2P97503 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Nkx3-2P97503 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Nkx3-2P97503 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
Nkx3-2P97503 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Nkx3-2P97503 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Nkx3-2P97503 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Nkx3-2P97503 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Nkx3-2P97503 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC14.77□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms