Protein–RNA interactions for Protein: P70178

Six5, Homeobox protein SIX5, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six5P70178 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Six5P70178 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Six5P70178 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Six5P70178 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Six5P70178 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Six5P70178 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC14.68□□□□□ -0.06
Six5P70178 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
Six5P70178 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC14.68□□□□□ -0.06
Six5P70178 Gm13830-205ENSMUST00000201195 1155 ntBASIC14.68□□□□□ -0.06
Six5P70178 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC14.68□□□□□ -0.06
Six5P70178 Spr-ps1-201ENSMUST00000089584 605 ntBASIC14.68□□□□□ -0.06
Six5P70178 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Six5P70178 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC14.68□□□□□ -0.06
Six5P70178 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Six5P70178 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC14.68□□□□□ -0.06
Six5P70178 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC14.68□□□□□ -0.06
Six5P70178 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC14.68□□□□□ -0.06
Six5P70178 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC14.68□□□□□ -0.06
Six5P70178 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Six5P70178 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Six5P70178 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Six5P70178 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Six5P70178 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Six5P70178 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Six5P70178 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Six5P70178 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
Six5P70178 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Six5P70178 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Six5P70178 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Six5P70178 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Six5P70178 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC14.67□□□□□ -0.06
Six5P70178 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Six5P70178 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC14.67□□□□□ -0.06
Six5P70178 Gm8655-201ENSMUST00000221159 852 ntBASIC14.67□□□□□ -0.06
Six5P70178 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Six5P70178 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Six5P70178 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Six5P70178 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC14.67□□□□□ -0.06
Six5P70178 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Six5P70178 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Six5P70178 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC14.67□□□□□ -0.06
Six5P70178 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC14.67□□□□□ -0.06
Six5P70178 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Six5P70178 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Six5P70178 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Six5P70178 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Six5P70178 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Six5P70178 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Six5P70178 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Six5P70178 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Six5P70178 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Six5P70178 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Six5P70178 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Six5P70178 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Six5P70178 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Six5P70178 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Six5P70178 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Six5P70178 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Six5P70178 Sybu-209ENSMUST00000228639 4113 ntBASIC14.66□□□□□ -0.06
Six5P70178 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC14.66□□□□□ -0.06
Six5P70178 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Six5P70178 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC14.66□□□□□ -0.06
Six5P70178 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Six5P70178 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Six5P70178 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Six5P70178 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Six5P70178 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Six5P70178 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Six5P70178 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Six5P70178 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Six5P70178 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Six5P70178 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC14.66□□□□□ -0.06
Six5P70178 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Six5P70178 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Six5P70178 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Six5P70178 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Six5P70178 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Six5P70178 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Six5P70178 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Six5P70178 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Six5P70178 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Six5P70178 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Six5P70178 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Six5P70178 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Six5P70178 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Six5P70178 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Six5P70178 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Six5P70178 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Six5P70178 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC14.65□□□□□ -0.06
Six5P70178 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC14.65□□□□□ -0.06
Six5P70178 Gm7506-201ENSMUST00000207758 815 ntBASIC14.65□□□□□ -0.06
Six5P70178 Cmtm5-203ENSMUST00000227441 610 ntBASIC14.65□□□□□ -0.06
Six5P70178 Rbfox2-207ENSMUST00000227533 1041 ntBASIC14.65□□□□□ -0.06
Six5P70178 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Six5P70178 Birc2-201ENSMUST00000054878 378 ntBASIC14.65□□□□□ -0.06
Six5P70178 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Six5P70178 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Six5P70178 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Six5P70178 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Six5P70178 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms