Protein–RNA interactions for Protein: P62858

Rps28, 40S ribosomal protein S28, mousemouse

Known RBP Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rps28P62858 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC9.29□□□□□ -0.92
Rps28P62858 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC9.29□□□□□ -0.92
Rps28P62858 Camk2g-217ENSMUST00000226630 1937 ntBASIC9.29□□□□□ -0.92
Rps28P62858 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Rps28P62858 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC9.29□□□□□ -0.92
Rps28P62858 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC9.29□□□□□ -0.92
Rps28P62858 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC9.29□□□□□ -0.92
Rps28P62858 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Rps28P62858 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Rps28P62858 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC9.29□□□□□ -0.92
Rps28P62858 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Rps28P62858 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Rps28P62858 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC9.29□□□□□ -0.92
Rps28P62858 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Rps28P62858 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC9.29□□□□□ -0.92
Rps28P62858 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Rps28P62858 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Rps28P62858 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC9.29□□□□□ -0.92
Rps28P62858 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Rps28P62858 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC9.29□□□□□ -0.92
Rps28P62858 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Rps28P62858 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC9.29□□□□□ -0.92
Rps28P62858 4631405K08Rik-201ENSMUST00000180420 2112 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Rps28P62858 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC9.29□□□□□ -0.92
Rps28P62858 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Rps28P62858 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC9.29□□□□□ -0.92
Rps28P62858 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC9.29□□□□□ -0.92
Rps28P62858 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Rps28P62858 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Rps28P62858 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Rps28P62858 Gm11405-201ENSMUST00000118689 1556 ntBASIC9.29□□□□□ -0.92
Rps28P62858 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC9.29□□□□□ -0.92
Rps28P62858 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC9.29□□□□□ -0.92
Rps28P62858 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC9.29□□□□□ -0.92
Rps28P62858 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Rps28P62858 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
Rps28P62858 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC9.28□□□□□ -0.92
Rps28P62858 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Rps28P62858 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Rps28P62858 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC9.28□□□□□ -0.92
Rps28P62858 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Rps28P62858 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC9.28□□□□□ -0.92
Rps28P62858 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Rps28P62858 Aldh3a1-202ENSMUST00000108716 1721 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Rps28P62858 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC9.28□□□□□ -0.92
Rps28P62858 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Rps28P62858 Bpnt1-201ENSMUST00000027916 2200 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Rps28P62858 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Rps28P62858 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Rps28P62858 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
Rps28P62858 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC9.28□□□□□ -0.92
Rps28P62858 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC9.28□□□□□ -0.92
Rps28P62858 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC9.28□□□□□ -0.92
Rps28P62858 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC9.28□□□□□ -0.92
Rps28P62858 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC9.28□□□□□ -0.92
Rps28P62858 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Rps28P62858 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Rps28P62858 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Rps28P62858 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Rps28P62858 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC9.28□□□□□ -0.92
Rps28P62858 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Rps28P62858 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Rps28P62858 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Rps28P62858 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Rps28P62858 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
Rps28P62858 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Rps28P62858 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Rps28P62858 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC9.28□□□□□ -0.92
Rps28P62858 Gm32036-201ENSMUST00000221484 2638 ntTSL 2 BASIC9.28□□□□□ -0.92
Rps28P62858 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC9.28□□□□□ -0.92
Rps28P62858 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC9.28□□□□□ -0.92
Rps28P62858 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC9.28□□□□□ -0.92
Rps28P62858 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Rps28P62858 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC9.28□□□□□ -0.92
Rps28P62858 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC9.27□□□□□ -0.92
Rps28P62858 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.92
Rps28P62858 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC9.27□□□□□ -0.92
Rps28P62858 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC9.27□□□□□ -0.92
Rps28P62858 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.92
Rps28P62858 Gm44086-201ENSMUST00000203251 2349 ntBASIC9.27□□□□□ -0.92
Rps28P62858 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.92
Rps28P62858 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Rps28P62858 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC9.27□□□□□ -0.93
Rps28P62858 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Rps28P62858 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Rps28P62858 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC9.27□□□□□ -0.93
Rps28P62858 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Rps28P62858 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC9.27□□□□□ -0.93
Rps28P62858 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC9.27□□□□□ -0.93
Rps28P62858 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC9.27□□□□□ -0.93
Rps28P62858 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC9.27□□□□□ -0.93
Rps28P62858 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC9.27□□□□□ -0.93
Rps28P62858 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Rps28P62858 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Rps28P62858 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Rps28P62858 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC9.27□□□□□ -0.93
Rps28P62858 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.93
Rps28P62858 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC9.27□□□□□ -0.93
Rps28P62858 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Rps28P62858 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms