Protein–RNA interactions for Protein: P62322

Lsm5, U6 snRNA-associated Sm-like protein LSm5, mousemouse

Predictions only

Length 91 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm5P62322 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Lsm5P62322 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Lsm5P62322 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Lsm5P62322 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Lsm5P62322 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Lsm5P62322 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Lsm5P62322 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Lsm5P62322 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC13.11□□□□□ -0.31
Lsm5P62322 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC13.11□□□□□ -0.31
Lsm5P62322 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC13.11□□□□□ -0.31
Lsm5P62322 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC13.11□□□□□ -0.31
Lsm5P62322 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Lsm5P62322 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Lsm5P62322 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Lsm5P62322 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Lsm5P62322 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Lsm5P62322 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Lsm5P62322 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Lsm5P62322 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Lsm5P62322 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Lsm5P62322 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Lsm5P62322 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Lsm5P62322 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Lsm5P62322 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Lsm5P62322 Gm9768-201ENSMUST00000206007 2861 ntBASIC13.1□□□□□ -0.31
Lsm5P62322 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Lsm5P62322 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Lsm5P62322 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Lsm5P62322 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Lsm5P62322 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Lsm5P62322 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC13.1□□□□□ -0.31
Lsm5P62322 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Lsm5P62322 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Lsm5P62322 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Lsm5P62322 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Lsm5P62322 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Lsm5P62322 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Lsm5P62322 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Lsm5P62322 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Lsm5P62322 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Lsm5P62322 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Lsm5P62322 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Lsm5P62322 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Lsm5P62322 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Lsm5P62322 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC13.1□□□□□ -0.31
Lsm5P62322 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Lsm5P62322 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Lsm5P62322 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Lsm5P62322 AC154855.1-201ENSMUST00000227353 1458 ntBASIC13.1□□□□□ -0.31
Lsm5P62322 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC13.09□□□□□ -0.31
Lsm5P62322 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Lsm5P62322 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Lsm5P62322 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Lsm5P62322 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Lsm5P62322 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Lsm5P62322 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Lsm5P62322 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC13.09□□□□□ -0.31
Lsm5P62322 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC13.09□□□□□ -0.31
Lsm5P62322 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC13.09□□□□□ -0.31
Lsm5P62322 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC13.09□□□□□ -0.31
Lsm5P62322 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC13.09□□□□□ -0.31
Lsm5P62322 H2-K2-201ENSMUST00000174250 1049 ntBASIC13.09□□□□□ -0.31
Lsm5P62322 Gm18666-201ENSMUST00000190039 958 ntBASIC13.09□□□□□ -0.31
Lsm5P62322 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC13.09□□□□□ -0.31
Lsm5P62322 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Lsm5P62322 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Lsm5P62322 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Lsm5P62322 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Lsm5P62322 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
Lsm5P62322 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Lsm5P62322 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC13.09□□□□□ -0.31
Lsm5P62322 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Lsm5P62322 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Lsm5P62322 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Lsm5P62322 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC13.09□□□□□ -0.31
Lsm5P62322 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Lsm5P62322 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Lsm5P62322 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC13.09□□□□□ -0.31
Lsm5P62322 Phf7-203ENSMUST00000226565 1971 ntBASIC13.09□□□□□ -0.31
Lsm5P62322 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Lsm5P62322 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.31
Lsm5P62322 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Lsm5P62322 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Lsm5P62322 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Lsm5P62322 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC13.08□□□□□ -0.32
Lsm5P62322 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC13.08□□□□□ -0.32
Lsm5P62322 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Lsm5P62322 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Lsm5P62322 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Lsm5P62322 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Lsm5P62322 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Lsm5P62322 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Lsm5P62322 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC13.08□□□□□ -0.32
Lsm5P62322 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC13.08□□□□□ -0.32
Lsm5P62322 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Lsm5P62322 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Lsm5P62322 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Lsm5P62322 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Lsm5P62322 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Lsm5P62322 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms