Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Tpm1P58771 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Tpm1P58771 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Tpm1P58771 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Tpm1P58771 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Tpm1P58771 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Tpm1P58771 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Tpm1P58771 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Tpm1P58771 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Tpm1P58771 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Tpm1P58771 Gm16061-201ENSMUST00000122167 857 ntBASIC17.52■□□□□ 0.4
Tpm1P58771 Gm8520-201ENSMUST00000186517 868 ntBASIC17.52■□□□□ 0.4
Tpm1P58771 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Tpm1P58771 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Tpm1P58771 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Tpm1P58771 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.39
Tpm1P58771 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
Tpm1P58771 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.39
Tpm1P58771 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC17.52■□□□□ 0.39
Tpm1P58771 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Tpm1P58771 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Tpm1P58771 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Tpm1P58771 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Tpm1P58771 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Tpm1P58771 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Tpm1P58771 Spsb2-203ENSMUST00000112473 1322 ntBASIC17.51■□□□□ 0.39
Tpm1P58771 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Tpm1P58771 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Tpm1P58771 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Tpm1P58771 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Tpm1P58771 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC17.51■□□□□ 0.39
Tpm1P58771 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Tpm1P58771 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Tpm1P58771 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Tpm1P58771 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Tpm1P58771 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Tpm1P58771 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC17.51■□□□□ 0.39
Tpm1P58771 Gm2274-201ENSMUST00000184539 609 ntBASIC17.51■□□□□ 0.39
Tpm1P58771 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Tpm1P58771 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Tpm1P58771 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Tpm1P58771 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Tpm1P58771 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Tpm1P58771 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Tpm1P58771 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Tpm1P58771 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Tpm1P58771 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Tpm1P58771 Gm38327-201ENSMUST00000195852 1755 ntBASIC17.51■□□□□ 0.39
Tpm1P58771 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Tpm1P58771 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Tpm1P58771 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC17.5■□□□□ 0.39
Tpm1P58771 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC17.5■□□□□ 0.39
Tpm1P58771 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Tpm1P58771 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Tpm1P58771 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Tpm1P58771 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Tpm1P58771 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC17.5■□□□□ 0.39
Tpm1P58771 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Tpm1P58771 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Tpm1P58771 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC17.5■□□□□ 0.39
Tpm1P58771 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Tpm1P58771 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC17.5■□□□□ 0.39
Tpm1P58771 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC17.5■□□□□ 0.39
Tpm1P58771 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Tpm1P58771 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Tpm1P58771 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Tpm1P58771 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC17.5■□□□□ 0.39
Tpm1P58771 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Tpm1P58771 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Tpm1P58771 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Tpm1P58771 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC17.5■□□□□ 0.39
Tpm1P58771 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Tpm1P58771 Gm45760-201ENSMUST00000212190 1782 ntBASIC17.5■□□□□ 0.39
Tpm1P58771 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Tpm1P58771 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Tpm1P58771 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Tpm1P58771 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Tpm1P58771 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Tpm1P58771 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Tpm1P58771 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Tpm1P58771 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Tpm1P58771 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Tpm1P58771 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Tpm1P58771 Gm10676-201ENSMUST00000098778 3221 ntBASIC17.49■□□□□ 0.39
Tpm1P58771 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Tpm1P58771 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Tpm1P58771 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Tpm1P58771 Mir5122-201ENSMUST00000175004 89 ntBASIC17.49■□□□□ 0.39
Tpm1P58771 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC17.49■□□□□ 0.39
Tpm1P58771 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC17.49■□□□□ 0.39
Tpm1P58771 Gm7213-201ENSMUST00000215977 950 ntBASIC17.49■□□□□ 0.39
Tpm1P58771 Arhgef33-211ENSMUST00000225658 473 ntBASIC17.49■□□□□ 0.39
Tpm1P58771 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Tpm1P58771 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Tpm1P58771 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Tpm1P58771 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Tpm1P58771 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC17.49■□□□□ 0.39
Tpm1P58771 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Tpm1P58771 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Tpm1P58771 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms