Protein–RNA interactions for Protein: P55271

Cdkn2b, Cyclin-dependent kinase 4 inhibitor B, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkn2bP55271 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC15.02□□□□□ -0.01
Cdkn2bP55271 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Cdkn2bP55271 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cdkn2bP55271 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
Cdkn2bP55271 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cdkn2bP55271 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
Cdkn2bP55271 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cdkn2bP55271 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC15.01□□□□□ -0.01
Cdkn2bP55271 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cdkn2bP55271 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
Cdkn2bP55271 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Cdkn2bP55271 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Cdkn2bP55271 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC15.01□□□□□ -0.01
Cdkn2bP55271 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cdkn2bP55271 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Cdkn2bP55271 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Cdkn2bP55271 Gm6433-201ENSMUST00000118634 875 ntBASIC15.01□□□□□ -0.01
Cdkn2bP55271 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Cdkn2bP55271 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Cdkn2bP55271 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC15.01□□□□□ -0.01
Cdkn2bP55271 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cdkn2bP55271 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cdkn2bP55271 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cdkn2bP55271 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC15.01□□□□□ -0.01
Cdkn2bP55271 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cdkn2bP55271 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cdkn2bP55271 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cdkn2bP55271 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cdkn2bP55271 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Cdkn2bP55271 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Cdkn2bP55271 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Cdkn2bP55271 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Cdkn2bP55271 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Cdkn2bP55271 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cdkn2bP55271 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Cdkn2bP55271 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Cdkn2bP55271 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Cdkn2bP55271 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Cdkn2bP55271 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC15□□□□□ -0.01
Cdkn2bP55271 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cdkn2bP55271 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cdkn2bP55271 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cdkn2bP55271 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC15□□□□□ -0.01
Cdkn2bP55271 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cdkn2bP55271 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC15□□□□□ -0.01
Cdkn2bP55271 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC15□□□□□ -0.01
Cdkn2bP55271 AC153881.2-201ENSMUST00000214877 204 ntBASIC15□□□□□ -0.01
Cdkn2bP55271 AC130713.1-201ENSMUST00000228853 1096 ntBASIC15□□□□□ -0.01
Cdkn2bP55271 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Cdkn2bP55271 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cdkn2bP55271 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cdkn2bP55271 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cdkn2bP55271 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cdkn2bP55271 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC15□□□□□ -0.01
Cdkn2bP55271 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Cdkn2bP55271 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Cdkn2bP55271 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC15□□□□□ -0.01
Cdkn2bP55271 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC15□□□□□ -0.01
Cdkn2bP55271 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cdkn2bP55271 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cdkn2bP55271 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cdkn2bP55271 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cdkn2bP55271 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Cdkn2bP55271 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC15□□□□□ -0.01
Cdkn2bP55271 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Cdkn2bP55271 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Cdkn2bP55271 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cdkn2bP55271 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC15□□□□□ -0.01
Cdkn2bP55271 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cdkn2bP55271 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cdkn2bP55271 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cdkn2bP55271 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cdkn2bP55271 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Cdkn2bP55271 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cdkn2bP55271 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cdkn2bP55271 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cdkn2bP55271 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cdkn2bP55271 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cdkn2bP55271 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC14.99□□□□□ -0.01
Cdkn2bP55271 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC14.99□□□□□ -0.01
Cdkn2bP55271 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Cdkn2bP55271 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC14.99□□□□□ -0.01
Cdkn2bP55271 Krtap5-1-202ENSMUST00000188274 742 ntBASIC14.99□□□□□ -0.01
Cdkn2bP55271 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cdkn2bP55271 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC14.99□□□□□ -0.01
Cdkn2bP55271 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC14.99□□□□□ -0.01
Cdkn2bP55271 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cdkn2bP55271 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cdkn2bP55271 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cdkn2bP55271 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cdkn2bP55271 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Cdkn2bP55271 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Cdkn2bP55271 Gm29340-201ENSMUST00000188763 3854 ntBASIC14.99□□□□□ -0.01
Cdkn2bP55271 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cdkn2bP55271 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Cdkn2bP55271 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC14.99□□□□□ -0.01
Cdkn2bP55271 Gm11960-202ENSMUST00000181063 2858 ntBASIC14.99□□□□□ -0.01
Cdkn2bP55271 Gm9768-201ENSMUST00000206007 2861 ntBASIC14.99□□□□□ -0.01
Cdkn2bP55271 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Cdkn2bP55271 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 47.4 ms