Protein–RNA interactions for Protein: P54729

Nub1, NEDD8 ultimate buster 1, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nub1P54729 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Nub1P54729 Gm8784-201ENSMUST00000222096 1435 ntBASIC16.87■□□□□ 0.29
Nub1P54729 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Nub1P54729 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Nub1P54729 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Nub1P54729 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Nub1P54729 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Nub1P54729 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Nub1P54729 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Nub1P54729 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Nub1P54729 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Nub1P54729 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Nub1P54729 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Nub1P54729 Gm4609-201ENSMUST00000106443 1002 ntBASIC16.86■□□□□ 0.29
Nub1P54729 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Nub1P54729 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Nub1P54729 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Nub1P54729 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC16.86■□□□□ 0.29
Nub1P54729 Gm5138-201ENSMUST00000113842 1002 ntBASIC16.86■□□□□ 0.29
Nub1P54729 Gm15191-201ENSMUST00000117933 1000 ntBASIC16.86■□□□□ 0.29
Nub1P54729 Gm12182-201ENSMUST00000118655 1008 ntBASIC16.86■□□□□ 0.29
Nub1P54729 Gm13882-201ENSMUST00000120886 1002 ntBASIC16.86■□□□□ 0.29
Nub1P54729 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC16.86■□□□□ 0.29
Nub1P54729 Gm10284-201ENSMUST00000145057 1005 ntBASIC16.86■□□□□ 0.29
Nub1P54729 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC16.86■□□□□ 0.29
Nub1P54729 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Nub1P54729 Gm10481-201ENSMUST00000179228 1002 ntBASIC16.86■□□□□ 0.29
Nub1P54729 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC16.86■□□□□ 0.29
Nub1P54729 Gm2574-201ENSMUST00000181051 1002 ntBASIC16.86■□□□□ 0.29
Nub1P54729 Gm3200-201ENSMUST00000181493 1002 ntBASIC16.86■□□□□ 0.29
Nub1P54729 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
Nub1P54729 Gm8825-201ENSMUST00000182565 998 ntBASIC16.86■□□□□ 0.29
Nub1P54729 Gm4518-201ENSMUST00000182638 718 ntBASIC16.86■□□□□ 0.29
Nub1P54729 Gm8330-201ENSMUST00000182754 1008 ntBASIC16.86■□□□□ 0.29
Nub1P54729 Gm4575-201ENSMUST00000182991 1002 ntBASIC16.86■□□□□ 0.29
Nub1P54729 Gm8709-201ENSMUST00000183230 1012 ntBASIC16.86■□□□□ 0.29
Nub1P54729 Gm27459-201ENSMUST00000184860 107 ntBASIC16.86■□□□□ 0.29
Nub1P54729 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC16.86■□□□□ 0.29
Nub1P54729 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Nub1P54729 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Nub1P54729 Gm10293-201ENSMUST00000076317 1002 ntBASIC16.86■□□□□ 0.29
Nub1P54729 Gm6316-201ENSMUST00000082064 1020 ntBASIC16.86■□□□□ 0.29
Nub1P54729 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Nub1P54729 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Nub1P54729 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC16.86■□□□□ 0.29
Nub1P54729 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC16.86■□□□□ 0.29
Nub1P54729 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Nub1P54729 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Nub1P54729 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Nub1P54729 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Nub1P54729 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Nub1P54729 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Nub1P54729 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Nub1P54729 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC16.85■□□□□ 0.29
Nub1P54729 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC16.85■□□□□ 0.29
Nub1P54729 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Nub1P54729 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Nub1P54729 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC16.85■□□□□ 0.29
Nub1P54729 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC16.85■□□□□ 0.29
Nub1P54729 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC16.85■□□□□ 0.29
Nub1P54729 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Nub1P54729 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
Nub1P54729 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Nub1P54729 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Nub1P54729 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC16.85■□□□□ 0.29
Nub1P54729 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
Nub1P54729 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC16.85■□□□□ 0.29
Nub1P54729 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Nub1P54729 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
Nub1P54729 AC093043.3-201ENSMUST00000226531 2273 ntBASIC16.85■□□□□ 0.29
Nub1P54729 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Nub1P54729 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Nub1P54729 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC16.85■□□□□ 0.29
Nub1P54729 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Nub1P54729 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Nub1P54729 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
Nub1P54729 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Nub1P54729 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Nub1P54729 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Nub1P54729 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
Nub1P54729 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Nub1P54729 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Nub1P54729 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Nub1P54729 Gm43347-201ENSMUST00000200226 580 ntBASIC16.84■□□□□ 0.29
Nub1P54729 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC16.84■□□□□ 0.29
Nub1P54729 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Nub1P54729 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Nub1P54729 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Nub1P54729 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Nub1P54729 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Nub1P54729 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Nub1P54729 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Nub1P54729 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Nub1P54729 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Nub1P54729 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Nub1P54729 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Nub1P54729 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC16.83■□□□□ 0.29
Nub1P54729 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Nub1P54729 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC16.83■□□□□ 0.29
Nub1P54729 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC16.83■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms