Protein–RNA interactions for Protein: P51448

Rora, Nuclear receptor ROR-alpha, mousemouse

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RoraP51448 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC14.8□□□□□ -0.04
RoraP51448 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC14.8□□□□□ -0.04
RoraP51448 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC14.8□□□□□ -0.04
RoraP51448 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
RoraP51448 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC14.8□□□□□ -0.04
RoraP51448 Gm27628-201ENSMUST00000184911 107 ntBASIC14.8□□□□□ -0.04
RoraP51448 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
RoraP51448 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
RoraP51448 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RoraP51448 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC14.8□□□□□ -0.04
RoraP51448 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
RoraP51448 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RoraP51448 Hivep3-201ENSMUST00000084306 2973 ntBASIC14.8□□□□□ -0.04
RoraP51448 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
RoraP51448 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
RoraP51448 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RoraP51448 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
RoraP51448 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC14.8□□□□□ -0.04
RoraP51448 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
RoraP51448 Gm26917-202ENSMUST00000192833 3329 ntBASIC14.8□□□□□ -0.04
RoraP51448 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RoraP51448 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC14.8□□□□□ -0.04
RoraP51448 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RoraP51448 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC14.8□□□□□ -0.04
RoraP51448 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
RoraP51448 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RoraP51448 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
RoraP51448 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
RoraP51448 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RoraP51448 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RoraP51448 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RoraP51448 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RoraP51448 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
RoraP51448 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
RoraP51448 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
RoraP51448 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC14.79□□□□□ -0.04
RoraP51448 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC14.79□□□□□ -0.04
RoraP51448 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RoraP51448 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RoraP51448 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC14.79□□□□□ -0.04
RoraP51448 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RoraP51448 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RoraP51448 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RoraP51448 Gm37935-201ENSMUST00000192012 982 ntBASIC14.79□□□□□ -0.04
RoraP51448 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC14.79□□□□□ -0.04
RoraP51448 Gm43072-201ENSMUST00000200283 1671 ntBASIC14.79□□□□□ -0.04
RoraP51448 Gm43332-201ENSMUST00000202511 1044 ntBASIC14.79□□□□□ -0.04
RoraP51448 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RoraP51448 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RoraP51448 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RoraP51448 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RoraP51448 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
RoraP51448 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RoraP51448 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RoraP51448 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
RoraP51448 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RoraP51448 Gm5867-201ENSMUST00000063197 592 ntBASIC14.79□□□□□ -0.04
RoraP51448 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RoraP51448 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RoraP51448 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RoraP51448 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
RoraP51448 AC069562.2-201ENSMUST00000224644 2146 ntBASIC14.78□□□□□ -0.04
RoraP51448 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC14.78□□□□□ -0.04
RoraP51448 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC14.78□□□□□ -0.04
RoraP51448 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
RoraP51448 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RoraP51448 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
RoraP51448 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC14.78□□□□□ -0.04
RoraP51448 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RoraP51448 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RoraP51448 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RoraP51448 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC14.78□□□□□ -0.04
RoraP51448 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RoraP51448 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
RoraP51448 Gm14140-201ENSMUST00000119999 995 ntBASIC14.78□□□□□ -0.04
RoraP51448 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RoraP51448 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC14.78□□□□□ -0.04
RoraP51448 AC084391.1-201ENSMUST00000200651 141 ntBASIC14.78□□□□□ -0.04
RoraP51448 Gm43935-201ENSMUST00000203569 1050 ntBASIC14.78□□□□□ -0.04
RoraP51448 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RoraP51448 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RoraP51448 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RoraP51448 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC14.78□□□□□ -0.04
RoraP51448 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RoraP51448 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
RoraP51448 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RoraP51448 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RoraP51448 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
RoraP51448 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
RoraP51448 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RoraP51448 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC14.78□□□□□ -0.04
RoraP51448 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
RoraP51448 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
RoraP51448 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
RoraP51448 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
RoraP51448 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC14.77□□□□□ -0.04
RoraP51448 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
RoraP51448 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
RoraP51448 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
RoraP51448 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms