Protein–RNA interactions for Protein: P48432

Sox2, Transcription factor SOX-2, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox2P48432 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Sox2P48432 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Sox2P48432 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Sox2P48432 Gm10676-201ENSMUST00000098778 3221 ntBASIC14.73□□□□□ -0.05
Sox2P48432 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC14.73□□□□□ -0.05
Sox2P48432 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
Sox2P48432 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC14.73□□□□□ -0.05
Sox2P48432 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Sox2P48432 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Sox2P48432 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC14.73□□□□□ -0.05
Sox2P48432 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC14.73□□□□□ -0.05
Sox2P48432 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Sox2P48432 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC14.73□□□□□ -0.05
Sox2P48432 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Sox2P48432 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Sox2P48432 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC14.73□□□□□ -0.05
Sox2P48432 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Sox2P48432 Gm37812-201ENSMUST00000195216 2475 ntBASIC14.73□□□□□ -0.05
Sox2P48432 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Sox2P48432 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Sox2P48432 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC14.73□□□□□ -0.05
Sox2P48432 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Sox2P48432 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Sox2P48432 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Sox2P48432 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Sox2P48432 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Sox2P48432 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Sox2P48432 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Sox2P48432 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC14.72□□□□□ -0.05
Sox2P48432 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Sox2P48432 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Sox2P48432 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Sox2P48432 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Sox2P48432 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
Sox2P48432 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Sox2P48432 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC14.72□□□□□ -0.05
Sox2P48432 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Sox2P48432 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC14.72□□□□□ -0.05
Sox2P48432 Gm43352-201ENSMUST00000196419 3065 ntBASIC14.72□□□□□ -0.05
Sox2P48432 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Sox2P48432 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC14.72□□□□□ -0.05
Sox2P48432 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Sox2P48432 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Sox2P48432 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Sox2P48432 Gm45133-201ENSMUST00000207548 2773 ntBASIC14.72□□□□□ -0.05
Sox2P48432 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC14.72□□□□□ -0.05
Sox2P48432 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC14.72□□□□□ -0.05
Sox2P48432 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Sox2P48432 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC14.71□□□□□ -0.05
Sox2P48432 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Sox2P48432 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Sox2P48432 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Sox2P48432 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Sox2P48432 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Sox2P48432 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Sox2P48432 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Sox2P48432 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Sox2P48432 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Sox2P48432 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC14.71□□□□□ -0.05
Sox2P48432 Gm26039-201ENSMUST00000158152 144 ntBASIC14.71□□□□□ -0.05
Sox2P48432 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC14.71□□□□□ -0.05
Sox2P48432 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Sox2P48432 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Sox2P48432 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Sox2P48432 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Sox2P48432 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Sox2P48432 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Sox2P48432 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Sox2P48432 Gm9889-202ENSMUST00000206983 1577 ntBASIC14.71□□□□□ -0.05
Sox2P48432 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC14.71□□□□□ -0.05
Sox2P48432 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Sox2P48432 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Sox2P48432 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC14.71□□□□□ -0.05
Sox2P48432 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Sox2P48432 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Sox2P48432 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Sox2P48432 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Sox2P48432 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Sox2P48432 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Sox2P48432 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Sox2P48432 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Sox2P48432 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Sox2P48432 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC14.7□□□□□ -0.06
Sox2P48432 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Sox2P48432 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Sox2P48432 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Sox2P48432 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Sox2P48432 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Sox2P48432 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Sox2P48432 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Sox2P48432 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC14.7□□□□□ -0.06
Sox2P48432 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Sox2P48432 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC14.7□□□□□ -0.06
Sox2P48432 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC14.7□□□□□ -0.06
Sox2P48432 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC14.7□□□□□ -0.06
Sox2P48432 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC14.7□□□□□ -0.06
Sox2P48432 Gm30025-201ENSMUST00000218555 728 ntBASIC14.7□□□□□ -0.06
Sox2P48432 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Sox2P48432 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Sox2P48432 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 59.9 ms