Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
Rfx3P48381 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
Rfx3P48381 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Rfx3P48381 Gm25016-201ENSMUST00000158399 131 ntBASIC14.18□□□□□ -0.14
Rfx3P48381 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Rfx3P48381 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rfx3P48381 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC14.18□□□□□ -0.14
Rfx3P48381 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rfx3P48381 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
Rfx3P48381 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Rfx3P48381 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rfx3P48381 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rfx3P48381 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rfx3P48381 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rfx3P48381 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Rfx3P48381 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rfx3P48381 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rfx3P48381 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rfx3P48381 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC14.17□□□□□ -0.14
Rfx3P48381 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rfx3P48381 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rfx3P48381 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rfx3P48381 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rfx3P48381 Zkscan4-202ENSMUST00000225845 1506 ntBASIC14.17□□□□□ -0.14
Rfx3P48381 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rfx3P48381 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rfx3P48381 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rfx3P48381 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rfx3P48381 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rfx3P48381 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Rfx3P48381 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Rfx3P48381 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rfx3P48381 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rfx3P48381 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC14.17□□□□□ -0.14
Rfx3P48381 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC14.17□□□□□ -0.14
Rfx3P48381 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rfx3P48381 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rfx3P48381 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rfx3P48381 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rfx3P48381 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rfx3P48381 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rfx3P48381 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rfx3P48381 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rfx3P48381 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rfx3P48381 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rfx3P48381 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Rfx3P48381 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rfx3P48381 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rfx3P48381 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
Rfx3P48381 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rfx3P48381 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Rfx3P48381 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rfx3P48381 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC14.16□□□□□ -0.14
Rfx3P48381 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rfx3P48381 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rfx3P48381 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Rfx3P48381 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Rfx3P48381 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Rfx3P48381 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Rfx3P48381 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Rfx3P48381 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rfx3P48381 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rfx3P48381 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC14.16□□□□□ -0.14
Rfx3P48381 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC14.16□□□□□ -0.14
Rfx3P48381 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Rfx3P48381 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC14.16□□□□□ -0.14
Rfx3P48381 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Rfx3P48381 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rfx3P48381 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Rfx3P48381 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rfx3P48381 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rfx3P48381 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rfx3P48381 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Rfx3P48381 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rfx3P48381 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rfx3P48381 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rfx3P48381 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rfx3P48381 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rfx3P48381 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC14.16□□□□□ -0.14
Rfx3P48381 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rfx3P48381 Gm8258-201ENSMUST00000055593 1449 ntBASIC14.15□□□□□ -0.14
Rfx3P48381 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC14.15□□□□□ -0.14
Rfx3P48381 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Rfx3P48381 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rfx3P48381 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rfx3P48381 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rfx3P48381 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rfx3P48381 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rfx3P48381 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rfx3P48381 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rfx3P48381 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Rfx3P48381 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rfx3P48381 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
Rfx3P48381 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rfx3P48381 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC14.15□□□□□ -0.14
Rfx3P48381 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Rfx3P48381 AC130671.1-201ENSMUST00000227384 1237 ntBASIC14.15□□□□□ -0.14
Rfx3P48381 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rfx3P48381 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Rfx3P48381 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms