Protein–RNA interactions for Protein: P46935

Nedd4, E3 ubiquitin-protein ligase NEDD4, mousemouse

Known RBP Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd4P46935 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nedd4P46935 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nedd4P46935 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nedd4P46935 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nedd4P46935 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nedd4P46935 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nedd4P46935 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nedd4P46935 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nedd4P46935 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC18.78■□□□□ 0.6
Nedd4P46935 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Nedd4P46935 Gm6257-201ENSMUST00000163864 910 ntBASIC18.78■□□□□ 0.6
Nedd4P46935 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC18.78■□□□□ 0.6
Nedd4P46935 Gm9794-201ENSMUST00000202370 423 ntBASIC18.78■□□□□ 0.6
Nedd4P46935 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Nedd4P46935 AC130829.1-201ENSMUST00000221548 494 ntBASIC18.78■□□□□ 0.6
Nedd4P46935 Cdk7-205ENSMUST00000225990 1159 ntBASIC18.78■□□□□ 0.6
Nedd4P46935 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Nedd4P46935 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nedd4P46935 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nedd4P46935 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC18.78■□□□□ 0.6
Nedd4P46935 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Nedd4P46935 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Nedd4P46935 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nedd4P46935 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nedd4P46935 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Nedd4P46935 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nedd4P46935 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nedd4P46935 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nedd4P46935 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nedd4P46935 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nedd4P46935 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nedd4P46935 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Nedd4P46935 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Nedd4P46935 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC18.77■□□□□ 0.6
Nedd4P46935 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC18.77■□□□□ 0.6
Nedd4P46935 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Nedd4P46935 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC18.77■□□□□ 0.6
Nedd4P46935 Gm2272-201ENSMUST00000194903 582 ntBASIC18.77■□□□□ 0.6
Nedd4P46935 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC18.77■□□□□ 0.6
Nedd4P46935 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
Nedd4P46935 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Nedd4P46935 AC166341.4-201ENSMUST00000220625 123 ntBASIC18.77■□□□□ 0.6
Nedd4P46935 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nedd4P46935 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nedd4P46935 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nedd4P46935 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nedd4P46935 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nedd4P46935 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Nedd4P46935 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Nedd4P46935 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Nedd4P46935 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nedd4P46935 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nedd4P46935 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Nedd4P46935 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nedd4P46935 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Nedd4P46935 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nedd4P46935 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
Nedd4P46935 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
Nedd4P46935 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Nedd4P46935 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC18.76■□□□□ 0.59
Nedd4P46935 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nedd4P46935 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Nedd4P46935 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC18.76■□□□□ 0.59
Nedd4P46935 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Nedd4P46935 Gm43433-201ENSMUST00000196573 481 ntBASIC18.76■□□□□ 0.59
Nedd4P46935 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC18.76■□□□□ 0.59
Nedd4P46935 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC18.76■□□□□ 0.59
Nedd4P46935 Gm6888-201ENSMUST00000221983 706 ntBASIC18.76■□□□□ 0.59
Nedd4P46935 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC18.76■□□□□ 0.59
Nedd4P46935 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nedd4P46935 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nedd4P46935 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC18.76■□□□□ 0.59
Nedd4P46935 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC18.76■□□□□ 0.59
Nedd4P46935 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC18.76■□□□□ 0.59
Nedd4P46935 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nedd4P46935 Gm13517-201ENSMUST00000120782 1495 ntBASIC18.76■□□□□ 0.59
Nedd4P46935 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nedd4P46935 Gm11841-201ENSMUST00000117060 1963 ntBASIC18.75■□□□□ 0.59
Nedd4P46935 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nedd4P46935 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nedd4P46935 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nedd4P46935 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nedd4P46935 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nedd4P46935 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nedd4P46935 Gm12490-201ENSMUST00000120255 560 ntBASIC18.75■□□□□ 0.59
Nedd4P46935 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC18.75■□□□□ 0.59
Nedd4P46935 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nedd4P46935 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Nedd4P46935 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Nedd4P46935 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nedd4P46935 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nedd4P46935 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nedd4P46935 AC124751.1-201ENSMUST00000222716 1408 ntBASIC18.74■□□□□ 0.59
Nedd4P46935 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Nedd4P46935 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Nedd4P46935 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nedd4P46935 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nedd4P46935 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Nedd4P46935 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Nedd4P46935 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms