Protein–RNA interactions for Protein: P43247

Msh2, DNA mismatch repair protein Msh2, mousemouse

Known RBP Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh2P43247 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Msh2P43247 Gm33142-201ENSMUST00000193913 867 ntBASIC16.19■□□□□ 0.18
Msh2P43247 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Msh2P43247 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Msh2P43247 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Msh2P43247 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Msh2P43247 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Msh2P43247 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Msh2P43247 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Msh2P43247 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Msh2P43247 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Msh2P43247 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Msh2P43247 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Msh2P43247 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Msh2P43247 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Msh2P43247 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Msh2P43247 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Msh2P43247 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Msh2P43247 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Msh2P43247 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Msh2P43247 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Msh2P43247 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Msh2P43247 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
Msh2P43247 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Msh2P43247 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
Msh2P43247 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC16.18■□□□□ 0.18
Msh2P43247 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC16.18■□□□□ 0.18
Msh2P43247 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Msh2P43247 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Msh2P43247 Gm36967-201ENSMUST00000193814 266 ntBASIC16.18■□□□□ 0.18
Msh2P43247 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Msh2P43247 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Msh2P43247 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Msh2P43247 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Msh2P43247 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Msh2P43247 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Msh2P43247 Zkscan4-202ENSMUST00000225845 1506 ntBASIC16.18■□□□□ 0.18
Msh2P43247 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Msh2P43247 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Msh2P43247 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Msh2P43247 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Msh2P43247 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC16.18■□□□□ 0.18
Msh2P43247 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Msh2P43247 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Msh2P43247 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Msh2P43247 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Msh2P43247 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Msh2P43247 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
Msh2P43247 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Msh2P43247 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC16.17■□□□□ 0.18
Msh2P43247 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Msh2P43247 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Msh2P43247 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Msh2P43247 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Msh2P43247 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Msh2P43247 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Msh2P43247 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Msh2P43247 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC16.17■□□□□ 0.18
Msh2P43247 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Msh2P43247 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC16.17■□□□□ 0.18
Msh2P43247 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Msh2P43247 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Msh2P43247 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Msh2P43247 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Msh2P43247 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC16.16■□□□□ 0.18
Msh2P43247 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Msh2P43247 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Msh2P43247 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Msh2P43247 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Msh2P43247 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Msh2P43247 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Msh2P43247 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Msh2P43247 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Msh2P43247 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC16.16■□□□□ 0.18
Msh2P43247 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC16.16■□□□□ 0.18
Msh2P43247 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Msh2P43247 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Msh2P43247 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Msh2P43247 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC16.16■□□□□ 0.18
Msh2P43247 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Msh2P43247 Gm9768-201ENSMUST00000206007 2861 ntBASIC16.16■□□□□ 0.18
Msh2P43247 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
Msh2P43247 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Msh2P43247 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Msh2P43247 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Msh2P43247 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Msh2P43247 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Msh2P43247 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Msh2P43247 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Msh2P43247 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Msh2P43247 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Msh2P43247 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC16.15■□□□□ 0.18
Msh2P43247 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC16.15■□□□□ 0.18
Msh2P43247 Gm45328-201ENSMUST00000210942 917 ntBASIC16.15■□□□□ 0.18
Msh2P43247 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Msh2P43247 AC154471.1-201ENSMUST00000224418 436 ntBASIC16.15■□□□□ 0.18
Msh2P43247 AC130671.1-201ENSMUST00000227384 1237 ntBASIC16.15■□□□□ 0.18
Msh2P43247 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Msh2P43247 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Msh2P43247 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms