Protein–RNA interactions for Protein: P41233

Abca1, ATP-binding cassette sub-family A member 1, mousemouse

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca1P41233 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC13.03□□□□□ -0.32
Abca1P41233 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Abca1P41233 Gm11764-201ENSMUST00000120221 623 ntBASIC13.02□□□□□ -0.32
Abca1P41233 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC13.02□□□□□ -0.32
Abca1P41233 Gm8655-201ENSMUST00000221159 852 ntBASIC13.02□□□□□ -0.32
Abca1P41233 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Abca1P41233 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC13.02□□□□□ -0.32
Abca1P41233 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Abca1P41233 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Abca1P41233 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Abca1P41233 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Abca1P41233 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Abca1P41233 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Abca1P41233 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Abca1P41233 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Abca1P41233 Gm7222-201ENSMUST00000117512 906 ntBASIC13.02□□□□□ -0.33
Abca1P41233 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Abca1P41233 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
Abca1P41233 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
Abca1P41233 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Abca1P41233 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Abca1P41233 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
Abca1P41233 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Abca1P41233 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC13.02□□□□□ -0.33
Abca1P41233 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Abca1P41233 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Abca1P41233 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Abca1P41233 Gm45779-201ENSMUST00000212189 4064 ntBASIC13.01□□□□□ -0.33
Abca1P41233 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC13.01□□□□□ -0.33
Abca1P41233 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
Abca1P41233 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Abca1P41233 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC13.01□□□□□ -0.33
Abca1P41233 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC13.01□□□□□ -0.33
Abca1P41233 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC13.01□□□□□ -0.33
Abca1P41233 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Abca1P41233 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC13.01□□□□□ -0.33
Abca1P41233 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Abca1P41233 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Abca1P41233 Gm37500-201ENSMUST00000192059 1443 ntBASIC13.01□□□□□ -0.33
Abca1P41233 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Abca1P41233 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Abca1P41233 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Abca1P41233 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Abca1P41233 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Abca1P41233 Gm15743-202ENSMUST00000182690 1901 ntBASIC13.01□□□□□ -0.33
Abca1P41233 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC13.01□□□□□ -0.33
Abca1P41233 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Abca1P41233 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Abca1P41233 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Abca1P41233 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Abca1P41233 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Abca1P41233 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Abca1P41233 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Abca1P41233 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Abca1P41233 Gm4913-201ENSMUST00000117075 1290 ntBASIC13.01□□□□□ -0.33
Abca1P41233 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC13.01□□□□□ -0.33
Abca1P41233 AC159106.1-201ENSMUST00000224421 690 ntBASIC13.01□□□□□ -0.33
Abca1P41233 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Abca1P41233 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Abca1P41233 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Abca1P41233 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC13.01□□□□□ -0.33
Abca1P41233 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Abca1P41233 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Abca1P41233 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Abca1P41233 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC13.01□□□□□ -0.33
Abca1P41233 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Abca1P41233 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Abca1P41233 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Abca1P41233 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Abca1P41233 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC13□□□□□ -0.33
Abca1P41233 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Abca1P41233 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Abca1P41233 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC13□□□□□ -0.33
Abca1P41233 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC13□□□□□ -0.33
Abca1P41233 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Abca1P41233 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Abca1P41233 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Abca1P41233 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC13□□□□□ -0.33
Abca1P41233 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Abca1P41233 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC13□□□□□ -0.33
Abca1P41233 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC13□□□□□ -0.33
Abca1P41233 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Abca1P41233 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Abca1P41233 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC13□□□□□ -0.33
Abca1P41233 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Abca1P41233 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Abca1P41233 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Abca1P41233 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Abca1P41233 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Abca1P41233 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Abca1P41233 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC13□□□□□ -0.33
Abca1P41233 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Abca1P41233 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Abca1P41233 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
Abca1P41233 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Abca1P41233 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Abca1P41233 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
Abca1P41233 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC13□□□□□ -0.33
Abca1P41233 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Abca1P41233 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms