Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC16.1■□□□□ 0.17
Cxcl12P40224 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Cxcl12P40224 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Cxcl12P40224 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Cxcl12P40224 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cxcl12P40224 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cxcl12P40224 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Cxcl12P40224 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cxcl12P40224 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cxcl12P40224 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cxcl12P40224 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cxcl12P40224 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cxcl12P40224 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Cxcl12P40224 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cxcl12P40224 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC16.1■□□□□ 0.17
Cxcl12P40224 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cxcl12P40224 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC16.1■□□□□ 0.17
Cxcl12P40224 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Cxcl12P40224 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cxcl12P40224 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cxcl12P40224 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cxcl12P40224 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Cxcl12P40224 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cxcl12P40224 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cxcl12P40224 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Cxcl12P40224 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cxcl12P40224 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cxcl12P40224 Gm13453-201ENSMUST00000118708 357 ntBASIC16.09■□□□□ 0.17
Cxcl12P40224 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC16.09■□□□□ 0.17
Cxcl12P40224 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Cxcl12P40224 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cxcl12P40224 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cxcl12P40224 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cxcl12P40224 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cxcl12P40224 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cxcl12P40224 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Cxcl12P40224 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Cxcl12P40224 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC16.09■□□□□ 0.17
Cxcl12P40224 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cxcl12P40224 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Cxcl12P40224 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cxcl12P40224 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC16.09■□□□□ 0.17
Cxcl12P40224 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
Cxcl12P40224 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Cxcl12P40224 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC16.08■□□□□ 0.17
Cxcl12P40224 Wnt10b-206ENSMUST00000228546 2709 ntBASIC16.08■□□□□ 0.16
Cxcl12P40224 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Cxcl12P40224 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Cxcl12P40224 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Cxcl12P40224 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC16.08■□□□□ 0.16
Cxcl12P40224 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC16.08■□□□□ 0.16
Cxcl12P40224 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Cxcl12P40224 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Cxcl12P40224 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Cxcl12P40224 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Cxcl12P40224 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Cxcl12P40224 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Cxcl12P40224 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Cxcl12P40224 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Cxcl12P40224 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Cxcl12P40224 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC16.08■□□□□ 0.16
Cxcl12P40224 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Cxcl12P40224 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Cxcl12P40224 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Cxcl12P40224 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cxcl12P40224 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cxcl12P40224 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cxcl12P40224 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC16.07■□□□□ 0.16
Cxcl12P40224 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC16.07■□□□□ 0.16
Cxcl12P40224 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC16.07■□□□□ 0.16
Cxcl12P40224 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Cxcl12P40224 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC16.07■□□□□ 0.16
Cxcl12P40224 Gm6973-201ENSMUST00000117080 721 ntBASIC16.07■□□□□ 0.16
Cxcl12P40224 Gm8410-201ENSMUST00000117225 605 ntBASIC16.07■□□□□ 0.16
Cxcl12P40224 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Cxcl12P40224 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC16.07■□□□□ 0.16
Cxcl12P40224 Gm7286-201ENSMUST00000182691 1007 ntBASIC16.07■□□□□ 0.16
Cxcl12P40224 Gm7730-201ENSMUST00000212486 454 ntBASIC16.07■□□□□ 0.16
Cxcl12P40224 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC16.07■□□□□ 0.16
Cxcl12P40224 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cxcl12P40224 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cxcl12P40224 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Cxcl12P40224 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cxcl12P40224 AC124751.1-201ENSMUST00000222716 1408 ntBASIC16.07■□□□□ 0.16
Cxcl12P40224 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cxcl12P40224 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Cxcl12P40224 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cxcl12P40224 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cxcl12P40224 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cxcl12P40224 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cxcl12P40224 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cxcl12P40224 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cxcl12P40224 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Cxcl12P40224 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC16.07■□□□□ 0.16
Cxcl12P40224 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Cxcl12P40224 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Cxcl12P40224 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC16.06■□□□□ 0.16
Cxcl12P40224 AC025913.2-201ENSMUST00000220136 1766 ntBASIC16.06■□□□□ 0.16
Cxcl12P40224 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cxcl12P40224 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC16.06■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 77.6 ms