Protein–RNA interactions for Protein: P39038

Cdh4, Cadherin-4, mousemouse

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh4P39038 Gm44367-201ENSMUST00000196836 138 ntBASIC14.99□□□□□ -0.01
Cdh4P39038 Gm44350-201ENSMUST00000197197 138 ntBASIC14.99□□□□□ -0.01
Cdh4P39038 Gm44390-201ENSMUST00000197533 144 ntBASIC14.99□□□□□ -0.01
Cdh4P39038 Gm44313-201ENSMUST00000198018 138 ntBASIC14.99□□□□□ -0.01
Cdh4P39038 Gm44486-201ENSMUST00000198508 138 ntBASIC14.99□□□□□ -0.01
Cdh4P39038 Gm44314-201ENSMUST00000199263 138 ntBASIC14.99□□□□□ -0.01
Cdh4P39038 Gm44394-201ENSMUST00000199558 138 ntBASIC14.99□□□□□ -0.01
Cdh4P39038 Gm44484-201ENSMUST00000199873 138 ntBASIC14.99□□□□□ -0.01
Cdh4P39038 Gm44466-201ENSMUST00000200264 138 ntBASIC14.99□□□□□ -0.01
Cdh4P39038 Gm44359-201ENSMUST00000200671 138 ntBASIC14.99□□□□□ -0.01
Cdh4P39038 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC14.99□□□□□ -0.01
Cdh4P39038 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cdh4P39038 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC14.99□□□□□ -0.01
Cdh4P39038 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cdh4P39038 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Cdh4P39038 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC14.99□□□□□ -0.01
Cdh4P39038 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Cdh4P39038 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Cdh4P39038 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC14.99□□□□□ -0.01
Cdh4P39038 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cdh4P39038 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cdh4P39038 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC14.99□□□□□ -0.01
Cdh4P39038 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cdh4P39038 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Cdh4P39038 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cdh4P39038 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Cdh4P39038 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cdh4P39038 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cdh4P39038 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cdh4P39038 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cdh4P39038 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Cdh4P39038 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC14.98□□□□□ -0.01
Cdh4P39038 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cdh4P39038 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cdh4P39038 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC14.98□□□□□ -0.01
Cdh4P39038 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cdh4P39038 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cdh4P39038 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC14.98□□□□□ -0.01
Cdh4P39038 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Cdh4P39038 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC14.98□□□□□ -0.01
Cdh4P39038 Wnt10b-206ENSMUST00000228546 2709 ntBASIC14.98□□□□□ -0.01
Cdh4P39038 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cdh4P39038 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Cdh4P39038 Gm44729-201ENSMUST00000206759 2052 ntBASIC14.98□□□□□ -0.01
Cdh4P39038 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cdh4P39038 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cdh4P39038 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Cdh4P39038 Gm11452-201ENSMUST00000122376 690 ntBASIC14.98□□□□□ -0.01
Cdh4P39038 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC14.98□□□□□ -0.01
Cdh4P39038 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cdh4P39038 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC14.98□□□□□ -0.01
Cdh4P39038 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Cdh4P39038 Gm4535-201ENSMUST00000182274 558 ntBASIC14.98□□□□□ -0.01
Cdh4P39038 Gm6376-201ENSMUST00000209407 580 ntBASIC14.98□□□□□ -0.01
Cdh4P39038 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC14.98□□□□□ -0.01
Cdh4P39038 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC14.98□□□□□ -0.01
Cdh4P39038 Gm18622-201ENSMUST00000219361 595 ntBASIC14.98□□□□□ -0.01
Cdh4P39038 Gm6296-201ENSMUST00000222599 943 ntBASIC14.98□□□□□ -0.01
Cdh4P39038 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cdh4P39038 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cdh4P39038 Gm10355-201ENSMUST00000097146 517 ntBASIC14.98□□□□□ -0.01
Cdh4P39038 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cdh4P39038 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cdh4P39038 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cdh4P39038 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cdh4P39038 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cdh4P39038 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cdh4P39038 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cdh4P39038 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cdh4P39038 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Cdh4P39038 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC14.98□□□□□ -0.01
Cdh4P39038 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cdh4P39038 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC14.98□□□□□ -0.01
Cdh4P39038 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cdh4P39038 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Cdh4P39038 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cdh4P39038 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cdh4P39038 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Cdh4P39038 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cdh4P39038 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Cdh4P39038 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Cdh4P39038 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Cdh4P39038 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC14.97□□□□□ -0.01
Cdh4P39038 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Cdh4P39038 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cdh4P39038 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cdh4P39038 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC14.97□□□□□ -0.01
Cdh4P39038 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Cdh4P39038 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cdh4P39038 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cdh4P39038 Gm13884-201ENSMUST00000118103 829 ntBASIC14.97□□□□□ -0.01
Cdh4P39038 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC14.97□□□□□ -0.01
Cdh4P39038 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Cdh4P39038 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC14.97□□□□□ -0.01
Cdh4P39038 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cdh4P39038 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cdh4P39038 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Cdh4P39038 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cdh4P39038 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cdh4P39038 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms