Protein–RNA interactions for Protein: P32958

Rom1, Rod outer segment membrane protein 1, mousemouse

Predictions only

Length 351 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rom1P32958 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rom1P32958 Gm29340-201ENSMUST00000188763 3854 ntBASIC12.43□□□□□ -0.42
Rom1P32958 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Rom1P32958 AC132265.1-201ENSMUST00000219233 1665 ntBASIC12.43□□□□□ -0.42
Rom1P32958 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rom1P32958 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rom1P32958 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC12.43□□□□□ -0.42
Rom1P32958 Trmt13-210ENSMUST00000198454 880 ntBASIC12.43□□□□□ -0.42
Rom1P32958 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rom1P32958 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rom1P32958 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rom1P32958 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rom1P32958 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC12.43□□□□□ -0.42
Rom1P32958 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rom1P32958 Gm37736-201ENSMUST00000193564 2802 ntBASIC12.43□□□□□ -0.42
Rom1P32958 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Rom1P32958 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rom1P32958 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC12.42□□□□□ -0.42
Rom1P32958 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Rom1P32958 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rom1P32958 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rom1P32958 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rom1P32958 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rom1P32958 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC12.42□□□□□ -0.42
Rom1P32958 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC12.42□□□□□ -0.42
Rom1P32958 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rom1P32958 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Rom1P32958 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rom1P32958 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Rom1P32958 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rom1P32958 Gm27463-201ENSMUST00000183569 57 ntBASIC12.42□□□□□ -0.42
Rom1P32958 AC175538.1-201ENSMUST00000225343 1269 ntBASIC12.42□□□□□ -0.42
Rom1P32958 Odf3b-204ENSMUST00000227834 930 ntBASIC12.42□□□□□ -0.42
Rom1P32958 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
Rom1P32958 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rom1P32958 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rom1P32958 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Rom1P32958 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rom1P32958 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rom1P32958 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rom1P32958 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rom1P32958 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rom1P32958 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rom1P32958 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rom1P32958 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rom1P32958 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Rom1P32958 AC148324.1-201ENSMUST00000219034 4240 ntBASIC12.42□□□□□ -0.42
Rom1P32958 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rom1P32958 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rom1P32958 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Rom1P32958 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rom1P32958 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rom1P32958 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rom1P32958 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rom1P32958 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rom1P32958 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rom1P32958 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC12.41□□□□□ -0.42
Rom1P32958 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Rom1P32958 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rom1P32958 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rom1P32958 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rom1P32958 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC12.41□□□□□ -0.42
Rom1P32958 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC12.41□□□□□ -0.42
Rom1P32958 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rom1P32958 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rom1P32958 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rom1P32958 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Rom1P32958 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rom1P32958 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC12.41□□□□□ -0.42
Rom1P32958 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rom1P32958 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Rom1P32958 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Rom1P32958 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Rom1P32958 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC12.41□□□□□ -0.42
Rom1P32958 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Rom1P32958 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rom1P32958 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rom1P32958 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rom1P32958 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC12.4□□□□□ -0.42
Rom1P32958 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Rom1P32958 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rom1P32958 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rom1P32958 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC12.4□□□□□ -0.42
Rom1P32958 Gm11336-201ENSMUST00000118168 334 ntBASIC12.4□□□□□ -0.42
Rom1P32958 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC12.4□□□□□ -0.42
Rom1P32958 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC12.4□□□□□ -0.42
Rom1P32958 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Rom1P32958 Gm16042-201ENSMUST00000204813 1247 ntBASIC12.4□□□□□ -0.42
Rom1P32958 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rom1P32958 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rom1P32958 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rom1P32958 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Rom1P32958 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rom1P32958 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rom1P32958 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rom1P32958 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rom1P32958 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC12.4□□□□□ -0.42
Rom1P32958 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Rom1P32958 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Rom1P32958 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms