Protein–RNA interactions for Protein: P28862

Mmp3, Stromelysin-1, mousemouse

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp3P28862 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Mmp3P28862 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Mmp3P28862 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Mmp3P28862 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Mmp3P28862 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC16.74■□□□□ 0.27
Mmp3P28862 AC154572.2-201ENSMUST00000225105 997 ntBASIC16.74■□□□□ 0.27
Mmp3P28862 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Mmp3P28862 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC16.74■□□□□ 0.27
Mmp3P28862 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC16.74■□□□□ 0.27
Mmp3P28862 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Mmp3P28862 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Mmp3P28862 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Mmp3P28862 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Mmp3P28862 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC16.74■□□□□ 0.27
Mmp3P28862 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Mmp3P28862 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Mmp3P28862 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Mmp3P28862 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Mmp3P28862 Gm45244-201ENSMUST00000211328 2200 ntBASIC16.73■□□□□ 0.27
Mmp3P28862 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
Mmp3P28862 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Mmp3P28862 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Mmp3P28862 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Mmp3P28862 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC16.73■□□□□ 0.27
Mmp3P28862 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Mmp3P28862 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC16.73■□□□□ 0.27
Mmp3P28862 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC16.73■□□□□ 0.27
Mmp3P28862 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Mmp3P28862 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
Mmp3P28862 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC16.73■□□□□ 0.27
Mmp3P28862 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Mmp3P28862 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Mmp3P28862 Gm15500-202ENSMUST00000071641 1019 ntBASIC16.73■□□□□ 0.27
Mmp3P28862 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Mmp3P28862 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Mmp3P28862 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Mmp3P28862 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Mmp3P28862 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Mmp3P28862 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Mmp3P28862 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Mmp3P28862 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC16.72■□□□□ 0.27
Mmp3P28862 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC16.72■□□□□ 0.27
Mmp3P28862 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Mmp3P28862 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Mmp3P28862 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
Mmp3P28862 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Mmp3P28862 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Mmp3P28862 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Mmp3P28862 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Mmp3P28862 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Mmp3P28862 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Mmp3P28862 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC16.72■□□□□ 0.27
Mmp3P28862 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC16.72■□□□□ 0.27
Mmp3P28862 Gm44492-201ENSMUST00000197012 141 ntBASIC16.72■□□□□ 0.27
Mmp3P28862 AC151286.1-201ENSMUST00000198489 145 ntBASIC16.72■□□□□ 0.27
Mmp3P28862 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC16.72■□□□□ 0.27
Mmp3P28862 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Mmp3P28862 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC16.72■□□□□ 0.27
Mmp3P28862 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Mmp3P28862 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Mmp3P28862 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Mmp3P28862 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Mmp3P28862 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Mmp3P28862 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Mmp3P28862 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Mmp3P28862 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Mmp3P28862 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Mmp3P28862 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Mmp3P28862 Gm13337-201ENSMUST00000119183 1594 ntBASIC16.72■□□□□ 0.27
Mmp3P28862 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Mmp3P28862 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC16.71■□□□□ 0.27
Mmp3P28862 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Mmp3P28862 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Mmp3P28862 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Mmp3P28862 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Mmp3P28862 Ntrk2-205ENSMUST00000224402 2284 ntBASIC16.71■□□□□ 0.27
Mmp3P28862 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC16.71■□□□□ 0.27
Mmp3P28862 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Mmp3P28862 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Mmp3P28862 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC16.71■□□□□ 0.27
Mmp3P28862 Gm17271-201ENSMUST00000165535 355 ntBASIC16.71■□□□□ 0.27
Mmp3P28862 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
Mmp3P28862 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC16.71■□□□□ 0.27
Mmp3P28862 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Mmp3P28862 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Mmp3P28862 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Mmp3P28862 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Mmp3P28862 Gm26917-202ENSMUST00000192833 3329 ntBASIC16.71■□□□□ 0.27
Mmp3P28862 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Mmp3P28862 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
Mmp3P28862 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
Mmp3P28862 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Mmp3P28862 AC119177.1-201ENSMUST00000227647 1332 ntBASIC16.7■□□□□ 0.26
Mmp3P28862 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Mmp3P28862 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
Mmp3P28862 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC16.7■□□□□ 0.26
Mmp3P28862 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Mmp3P28862 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Mmp3P28862 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Mmp3P28862 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC16.7■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 53.9 ms