Protein–RNA interactions for Protein: P28704

Rxrb, Retinoic acid receptor RXR-beta, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RxrbP28704 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC15.76■□□□□ 0.11
RxrbP28704 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RxrbP28704 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RxrbP28704 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
RxrbP28704 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RxrbP28704 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RxrbP28704 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
RxrbP28704 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC15.76■□□□□ 0.11
RxrbP28704 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
RxrbP28704 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
RxrbP28704 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RxrbP28704 AC122351.1-201ENSMUST00000220467 126 ntBASIC15.76■□□□□ 0.11
RxrbP28704 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC15.76■□□□□ 0.11
RxrbP28704 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
RxrbP28704 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RxrbP28704 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
RxrbP28704 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
RxrbP28704 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RxrbP28704 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
RxrbP28704 Gm44291-201ENSMUST00000203102 2865 ntBASIC15.76■□□□□ 0.11
RxrbP28704 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RxrbP28704 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RxrbP28704 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
RxrbP28704 Gm43697-201ENSMUST00000199637 2581 ntBASIC15.76■□□□□ 0.11
RxrbP28704 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC15.76■□□□□ 0.11
RxrbP28704 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
RxrbP28704 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RxrbP28704 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RxrbP28704 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
RxrbP28704 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
RxrbP28704 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RxrbP28704 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RxrbP28704 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RxrbP28704 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC15.75■□□□□ 0.11
RxrbP28704 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
RxrbP28704 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RxrbP28704 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RxrbP28704 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
RxrbP28704 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
RxrbP28704 AL672049.1-201ENSMUST00000197943 91 ntBASIC15.75■□□□□ 0.11
RxrbP28704 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
RxrbP28704 AC112142.1-201ENSMUST00000228796 918 ntBASIC15.75■□□□□ 0.11
RxrbP28704 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
RxrbP28704 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RxrbP28704 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RxrbP28704 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
RxrbP28704 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RxrbP28704 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RxrbP28704 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
RxrbP28704 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
RxrbP28704 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC15.75■□□□□ 0.11
RxrbP28704 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RxrbP28704 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RxrbP28704 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
RxrbP28704 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
RxrbP28704 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RxrbP28704 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RxrbP28704 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC15.75■□□□□ 0.11
RxrbP28704 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RxrbP28704 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
RxrbP28704 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
RxrbP28704 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RxrbP28704 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
RxrbP28704 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC15.74■□□□□ 0.11
RxrbP28704 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RxrbP28704 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RxrbP28704 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
RxrbP28704 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RxrbP28704 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC15.74■□□□□ 0.11
RxrbP28704 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
RxrbP28704 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RxrbP28704 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
RxrbP28704 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
RxrbP28704 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RxrbP28704 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
RxrbP28704 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
RxrbP28704 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
RxrbP28704 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RxrbP28704 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RxrbP28704 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RxrbP28704 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RxrbP28704 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
RxrbP28704 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RxrbP28704 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
RxrbP28704 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RxrbP28704 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
RxrbP28704 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RxrbP28704 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC15.73■□□□□ 0.11
RxrbP28704 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
RxrbP28704 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
RxrbP28704 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
RxrbP28704 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC15.73■□□□□ 0.11
RxrbP28704 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RxrbP28704 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
RxrbP28704 Gm45058-201ENSMUST00000205810 766 ntBASIC15.73■□□□□ 0.11
RxrbP28704 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC15.73■□□□□ 0.11
RxrbP28704 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RxrbP28704 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC15.73■□□□□ 0.11
RxrbP28704 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RxrbP28704 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 47.9 ms