Protein–RNA interactions for Protein: P28660

Nckap1, Nck-associated protein 1, mousemouse

Known RBP Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nckap1P28660 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
Nckap1P28660 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Nckap1P28660 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC15.58■□□□□ 0.08
Nckap1P28660 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Nckap1P28660 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
Nckap1P28660 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Nckap1P28660 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Nckap1P28660 Gm11185-201ENSMUST00000117732 1007 ntBASIC15.58■□□□□ 0.08
Nckap1P28660 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC15.58■□□□□ 0.08
Nckap1P28660 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC15.58■□□□□ 0.08
Nckap1P28660 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Nckap1P28660 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC15.58■□□□□ 0.08
Nckap1P28660 AC131709.1-201ENSMUST00000224731 1180 ntBASIC15.58■□□□□ 0.08
Nckap1P28660 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
Nckap1P28660 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Nckap1P28660 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Nckap1P28660 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Nckap1P28660 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
Nckap1P28660 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Nckap1P28660 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Nckap1P28660 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Nckap1P28660 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Nckap1P28660 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
Nckap1P28660 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
Nckap1P28660 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Nckap1P28660 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Nckap1P28660 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Nckap1P28660 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Nckap1P28660 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Nckap1P28660 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Nckap1P28660 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Nckap1P28660 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC15.57■□□□□ 0.08
Nckap1P28660 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Nckap1P28660 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Nckap1P28660 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Nckap1P28660 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Nckap1P28660 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC15.57■□□□□ 0.08
Nckap1P28660 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
Nckap1P28660 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Nckap1P28660 Mir8117-201ENSMUST00000184773 107 ntBASIC15.57■□□□□ 0.08
Nckap1P28660 Gm45167-201ENSMUST00000208007 322 ntBASIC15.57■□□□□ 0.08
Nckap1P28660 AC225888.1-201ENSMUST00000227184 728 ntBASIC15.57■□□□□ 0.08
Nckap1P28660 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Nckap1P28660 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Nckap1P28660 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Nckap1P28660 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Nckap1P28660 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Nckap1P28660 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Nckap1P28660 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Nckap1P28660 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Nckap1P28660 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Nckap1P28660 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Nckap1P28660 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Nckap1P28660 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Nckap1P28660 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Nckap1P28660 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Nckap1P28660 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Nckap1P28660 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Nckap1P28660 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Nckap1P28660 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Nckap1P28660 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Nckap1P28660 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Nckap1P28660 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Nckap1P28660 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
Nckap1P28660 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Nckap1P28660 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Nckap1P28660 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC15.56■□□□□ 0.08
Nckap1P28660 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Nckap1P28660 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
Nckap1P28660 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Nckap1P28660 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Nckap1P28660 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC15.56■□□□□ 0.08
Nckap1P28660 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC15.56■□□□□ 0.08
Nckap1P28660 AC174742.1-201ENSMUST00000218272 304 ntBASIC15.56■□□□□ 0.08
Nckap1P28660 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Nckap1P28660 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Nckap1P28660 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Nckap1P28660 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Nckap1P28660 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC15.56■□□□□ 0.08
Nckap1P28660 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Nckap1P28660 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC15.56■□□□□ 0.08
Nckap1P28660 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Nckap1P28660 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Nckap1P28660 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Nckap1P28660 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC15.56■□□□□ 0.08
Nckap1P28660 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Nckap1P28660 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Nckap1P28660 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Nckap1P28660 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Nckap1P28660 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Nckap1P28660 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Nckap1P28660 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Nckap1P28660 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Nckap1P28660 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Nckap1P28660 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Nckap1P28660 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Nckap1P28660 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Nckap1P28660 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC15.55■□□□□ 0.08
Nckap1P28660 Mir3113-201ENSMUST00000175478 76 ntBASIC15.55■□□□□ 0.08
Nckap1P28660 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms