Protein–RNA interactions for Protein: P27664

Pde6a, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha, mousemouse

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6aP27664 Gm3928-201ENSMUST00000121141 1307 ntBASIC18.16■□□□□ 0.5
Pde6aP27664 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pde6aP27664 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pde6aP27664 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
Pde6aP27664 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Pde6aP27664 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pde6aP27664 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Pde6aP27664 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC18.15■□□□□ 0.5
Pde6aP27664 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Pde6aP27664 Gm7230-201ENSMUST00000173026 815 ntBASIC18.15■□□□□ 0.5
Pde6aP27664 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pde6aP27664 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Pde6aP27664 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pde6aP27664 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC18.15■□□□□ 0.5
Pde6aP27664 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pde6aP27664 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pde6aP27664 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Pde6aP27664 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pde6aP27664 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pde6aP27664 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pde6aP27664 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC18.14■□□□□ 0.49
Pde6aP27664 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pde6aP27664 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pde6aP27664 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pde6aP27664 Gm15173-201ENSMUST00000122049 433 ntBASIC18.14■□□□□ 0.49
Pde6aP27664 Gm10060-201ENSMUST00000212002 111 ntBASIC18.14■□□□□ 0.49
Pde6aP27664 AC122024.2-201ENSMUST00000220086 871 ntBASIC18.14■□□□□ 0.49
Pde6aP27664 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC18.14■□□□□ 0.49
Pde6aP27664 AC159093.1-201ENSMUST00000227779 380 ntBASIC18.14■□□□□ 0.49
Pde6aP27664 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Pde6aP27664 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Pde6aP27664 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Pde6aP27664 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pde6aP27664 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pde6aP27664 Gm37500-201ENSMUST00000192059 1443 ntBASIC18.14■□□□□ 0.49
Pde6aP27664 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC18.14■□□□□ 0.49
Pde6aP27664 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC18.14■□□□□ 0.49
Pde6aP27664 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Pde6aP27664 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pde6aP27664 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pde6aP27664 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pde6aP27664 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Pde6aP27664 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pde6aP27664 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pde6aP27664 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Pde6aP27664 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Pde6aP27664 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC18.13■□□□□ 0.49
Pde6aP27664 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Pde6aP27664 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Pde6aP27664 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC18.13■□□□□ 0.49
Pde6aP27664 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pde6aP27664 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pde6aP27664 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pde6aP27664 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Pde6aP27664 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pde6aP27664 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Pde6aP27664 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC18.13■□□□□ 0.49
Pde6aP27664 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pde6aP27664 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pde6aP27664 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pde6aP27664 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC18.12■□□□□ 0.49
Pde6aP27664 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Pde6aP27664 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pde6aP27664 Gm5682-201ENSMUST00000173402 505 ntBASIC18.12■□□□□ 0.49
Pde6aP27664 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Pde6aP27664 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC18.12■□□□□ 0.49
Pde6aP27664 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Pde6aP27664 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC18.12■□□□□ 0.49
Pde6aP27664 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC18.12■□□□□ 0.49
Pde6aP27664 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pde6aP27664 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC18.12■□□□□ 0.49
Pde6aP27664 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pde6aP27664 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Pde6aP27664 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Pde6aP27664 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pde6aP27664 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC18.12■□□□□ 0.49
Pde6aP27664 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC18.12■□□□□ 0.49
Pde6aP27664 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC18.11■□□□□ 0.49
Pde6aP27664 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pde6aP27664 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pde6aP27664 Gm2308-201ENSMUST00000166539 1004 ntBASIC18.11■□□□□ 0.49
Pde6aP27664 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Pde6aP27664 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC18.11■□□□□ 0.49
Pde6aP27664 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Pde6aP27664 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pde6aP27664 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pde6aP27664 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pde6aP27664 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pde6aP27664 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pde6aP27664 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pde6aP27664 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Pde6aP27664 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pde6aP27664 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Pde6aP27664 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Pde6aP27664 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pde6aP27664 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pde6aP27664 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pde6aP27664 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pde6aP27664 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pde6aP27664 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 48.6 ms