Protein–RNA interactions for Protein: P27548

Cd40lg, CD40 ligand, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40lgP27548 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Cd40lgP27548 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC14.44□□□□□ -0.1
Cd40lgP27548 Wnt10b-206ENSMUST00000228546 2709 ntBASIC14.44□□□□□ -0.1
Cd40lgP27548 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cd40lgP27548 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cd40lgP27548 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Cd40lgP27548 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cd40lgP27548 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cd40lgP27548 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Cd40lgP27548 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cd40lgP27548 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Cd40lgP27548 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cd40lgP27548 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Cd40lgP27548 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cd40lgP27548 Gm24589-201ENSMUST00000116692 94 ntBASIC14.44□□□□□ -0.1
Cd40lgP27548 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Cd40lgP27548 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC14.44□□□□□ -0.1
Cd40lgP27548 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Cd40lgP27548 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Cd40lgP27548 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cd40lgP27548 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cd40lgP27548 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cd40lgP27548 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cd40lgP27548 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Cd40lgP27548 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cd40lgP27548 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cd40lgP27548 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Cd40lgP27548 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC14.44□□□□□ -0.1
Cd40lgP27548 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cd40lgP27548 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cd40lgP27548 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cd40lgP27548 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Cd40lgP27548 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Cd40lgP27548 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Cd40lgP27548 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cd40lgP27548 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cd40lgP27548 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Cd40lgP27548 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Cd40lgP27548 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cd40lgP27548 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC14.43□□□□□ -0.1
Cd40lgP27548 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cd40lgP27548 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cd40lgP27548 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cd40lgP27548 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
Cd40lgP27548 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC14.43□□□□□ -0.1
Cd40lgP27548 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cd40lgP27548 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC14.43□□□□□ -0.1
Cd40lgP27548 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC14.43□□□□□ -0.1
Cd40lgP27548 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC14.43□□□□□ -0.1
Cd40lgP27548 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cd40lgP27548 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cd40lgP27548 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Cd40lgP27548 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cd40lgP27548 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Cd40lgP27548 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cd40lgP27548 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cd40lgP27548 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cd40lgP27548 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cd40lgP27548 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cd40lgP27548 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cd40lgP27548 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Cd40lgP27548 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cd40lgP27548 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cd40lgP27548 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cd40lgP27548 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cd40lgP27548 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cd40lgP27548 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cd40lgP27548 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Cd40lgP27548 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cd40lgP27548 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC14.42□□□□□ -0.1
Cd40lgP27548 Gm14464-201ENSMUST00000119658 1254 ntBASIC14.42□□□□□ -0.1
Cd40lgP27548 Gm1818-201ENSMUST00000169406 1184 ntBASIC14.42□□□□□ -0.1
Cd40lgP27548 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cd40lgP27548 AC127349.1-201ENSMUST00000224590 266 ntBASIC14.42□□□□□ -0.1
Cd40lgP27548 Cmtm5-203ENSMUST00000227441 610 ntBASIC14.42□□□□□ -0.1
Cd40lgP27548 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cd40lgP27548 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Cd40lgP27548 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC14.42□□□□□ -0.1
Cd40lgP27548 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cd40lgP27548 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cd40lgP27548 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cd40lgP27548 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cd40lgP27548 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
Cd40lgP27548 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cd40lgP27548 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cd40lgP27548 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cd40lgP27548 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Cd40lgP27548 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cd40lgP27548 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC14.42□□□□□ -0.1
Cd40lgP27548 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cd40lgP27548 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
Cd40lgP27548 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Cd40lgP27548 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cd40lgP27548 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cd40lgP27548 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cd40lgP27548 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cd40lgP27548 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cd40lgP27548 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cd40lgP27548 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cd40lgP27548 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms