Protein–RNA interactions for Protein: P10629

Hoxc6, Homeobox protein Hox-C6, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc6P10629 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Hoxc6P10629 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Hoxc6P10629 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Hoxc6P10629 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC17.33■□□□□ 0.36
Hoxc6P10629 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Hoxc6P10629 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Hoxc6P10629 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Hoxc6P10629 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Hoxc6P10629 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC17.33■□□□□ 0.36
Hoxc6P10629 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Hoxc6P10629 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Hoxc6P10629 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Hoxc6P10629 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Hoxc6P10629 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Hoxc6P10629 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Hoxc6P10629 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
Hoxc6P10629 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hoxc6P10629 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hoxc6P10629 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hoxc6P10629 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hoxc6P10629 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hoxc6P10629 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hoxc6P10629 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Hoxc6P10629 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Hoxc6P10629 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Hoxc6P10629 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC17.32■□□□□ 0.36
Hoxc6P10629 Gm12008-201ENSMUST00000117791 755 ntBASIC17.32■□□□□ 0.36
Hoxc6P10629 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
Hoxc6P10629 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Hoxc6P10629 Gm43125-201ENSMUST00000201724 730 ntBASIC17.32■□□□□ 0.36
Hoxc6P10629 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC17.32■□□□□ 0.36
Hoxc6P10629 AC131187.1-201ENSMUST00000224567 809 ntBASIC17.32■□□□□ 0.36
Hoxc6P10629 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hoxc6P10629 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hoxc6P10629 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Hoxc6P10629 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC17.32■□□□□ 0.36
Hoxc6P10629 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
Hoxc6P10629 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hoxc6P10629 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hoxc6P10629 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Hoxc6P10629 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hoxc6P10629 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hoxc6P10629 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Hoxc6P10629 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Hoxc6P10629 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hoxc6P10629 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hoxc6P10629 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC17.31■□□□□ 0.36
Hoxc6P10629 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hoxc6P10629 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hoxc6P10629 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hoxc6P10629 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Hoxc6P10629 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Hoxc6P10629 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Hoxc6P10629 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Hoxc6P10629 AC115863.1-201ENSMUST00000214815 1813 ntBASIC17.31■□□□□ 0.36
Hoxc6P10629 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hoxc6P10629 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hoxc6P10629 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Hoxc6P10629 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hoxc6P10629 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hoxc6P10629 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hoxc6P10629 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Hoxc6P10629 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hoxc6P10629 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Hoxc6P10629 Gm5184-201ENSMUST00000220417 1702 ntBASIC17.3■□□□□ 0.36
Hoxc6P10629 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
Hoxc6P10629 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hoxc6P10629 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hoxc6P10629 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hoxc6P10629 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hoxc6P10629 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hoxc6P10629 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC17.3■□□□□ 0.36
Hoxc6P10629 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Hoxc6P10629 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Hoxc6P10629 Mir449b-201ENSMUST00000104833 80 ntBASIC17.3■□□□□ 0.36
Hoxc6P10629 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC17.3■□□□□ 0.36
Hoxc6P10629 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Hoxc6P10629 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC17.3■□□□□ 0.36
Hoxc6P10629 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC17.3■□□□□ 0.36
Hoxc6P10629 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC17.3■□□□□ 0.36
Hoxc6P10629 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC17.3■□□□□ 0.36
Hoxc6P10629 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC17.3■□□□□ 0.36
Hoxc6P10629 AC124732.2-201ENSMUST00000221977 316 ntBASIC17.3■□□□□ 0.36
Hoxc6P10629 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hoxc6P10629 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hoxc6P10629 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Hoxc6P10629 Nudt18-203ENSMUST00000228768 1578 ntBASIC17.3■□□□□ 0.36
Hoxc6P10629 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hoxc6P10629 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hoxc6P10629 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hoxc6P10629 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Hoxc6P10629 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hoxc6P10629 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
Hoxc6P10629 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC17.3■□□□□ 0.36
Hoxc6P10629 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hoxc6P10629 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC17.29■□□□□ 0.36
Hoxc6P10629 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Hoxc6P10629 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hoxc6P10629 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hoxc6P10629 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms