Protein–RNA interactions for Protein: P10146

Ccl1, C-C motif chemokine 1, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl1P10146 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Ccl1P10146 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ccl1P10146 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ccl1P10146 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Ccl1P10146 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ccl1P10146 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Ccl1P10146 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Ccl1P10146 Gm27405-201ENSMUST00000184201 112 ntBASIC12.21□□□□□ -0.45
Ccl1P10146 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ccl1P10146 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ccl1P10146 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Ccl1P10146 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC12.21□□□□□ -0.45
Ccl1P10146 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ccl1P10146 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ccl1P10146 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ccl1P10146 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC12.21□□□□□ -0.45
Ccl1P10146 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ccl1P10146 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ccl1P10146 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Ccl1P10146 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Ccl1P10146 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Ccl1P10146 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Ccl1P10146 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Ccl1P10146 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Ccl1P10146 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Ccl1P10146 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC12.21□□□□□ -0.46
Ccl1P10146 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Ccl1P10146 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Ccl1P10146 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccl1P10146 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC12.2□□□□□ -0.46
Ccl1P10146 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Ccl1P10146 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Ccl1P10146 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccl1P10146 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccl1P10146 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccl1P10146 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccl1P10146 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccl1P10146 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Ccl1P10146 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccl1P10146 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccl1P10146 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC12.2□□□□□ -0.46
Ccl1P10146 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC12.2□□□□□ -0.46
Ccl1P10146 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC12.2□□□□□ -0.46
Ccl1P10146 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccl1P10146 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Ccl1P10146 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccl1P10146 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccl1P10146 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccl1P10146 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Ccl1P10146 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC12.2□□□□□ -0.46
Ccl1P10146 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccl1P10146 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Ccl1P10146 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC12.2□□□□□ -0.46
Ccl1P10146 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Ccl1P10146 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccl1P10146 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Ccl1P10146 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccl1P10146 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccl1P10146 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC12.2□□□□□ -0.46
Ccl1P10146 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccl1P10146 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Ccl1P10146 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Ccl1P10146 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccl1P10146 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccl1P10146 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccl1P10146 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Ccl1P10146 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccl1P10146 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccl1P10146 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccl1P10146 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccl1P10146 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Ccl1P10146 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Ccl1P10146 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
Ccl1P10146 H2-K2-201ENSMUST00000174250 1049 ntBASIC12.19□□□□□ -0.46
Ccl1P10146 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC12.19□□□□□ -0.46
Ccl1P10146 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccl1P10146 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccl1P10146 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccl1P10146 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccl1P10146 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Ccl1P10146 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccl1P10146 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccl1P10146 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccl1P10146 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Ccl1P10146 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccl1P10146 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccl1P10146 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC12.19□□□□□ -0.46
Ccl1P10146 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccl1P10146 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccl1P10146 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccl1P10146 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccl1P10146 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccl1P10146 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccl1P10146 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccl1P10146 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccl1P10146 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Ccl1P10146 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccl1P10146 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccl1P10146 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccl1P10146 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms