Protein–RNA interactions for Protein: P0C8K7

Smim1, Small integral membrane protein 1, mousemouse

Predictions only

Length 78 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim1P0C8K7 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
Smim1P0C8K7 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC10.83□□□□□ -0.68
Smim1P0C8K7 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC10.83□□□□□ -0.68
Smim1P0C8K7 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Smim1P0C8K7 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC10.83□□□□□ -0.68
Smim1P0C8K7 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC10.83□□□□□ -0.68
Smim1P0C8K7 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC10.83□□□□□ -0.68
Smim1P0C8K7 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Smim1P0C8K7 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Smim1P0C8K7 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Smim1P0C8K7 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Smim1P0C8K7 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Smim1P0C8K7 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Smim1P0C8K7 Gm38391-201ENSMUST00000191720 4069 ntBASIC10.83□□□□□ -0.68
Smim1P0C8K7 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Smim1P0C8K7 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Smim1P0C8K7 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Smim1P0C8K7 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC10.83□□□□□ -0.68
Smim1P0C8K7 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC10.83□□□□□ -0.68
Smim1P0C8K7 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Smim1P0C8K7 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Smim1P0C8K7 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Smim1P0C8K7 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC10.83□□□□□ -0.68
Smim1P0C8K7 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Smim1P0C8K7 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Smim1P0C8K7 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Smim1P0C8K7 Slc35b2-202ENSMUST00000223987 1766 ntBASIC10.82□□□□□ -0.68
Smim1P0C8K7 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Smim1P0C8K7 Ap5m1-205ENSMUST00000227431 3757 ntBASIC10.82□□□□□ -0.68
Smim1P0C8K7 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Smim1P0C8K7 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Smim1P0C8K7 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Smim1P0C8K7 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Smim1P0C8K7 Gm45003-201ENSMUST00000205875 2158 ntBASIC10.82□□□□□ -0.68
Smim1P0C8K7 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC10.82□□□□□ -0.68
Smim1P0C8K7 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Smim1P0C8K7 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Smim1P0C8K7 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Smim1P0C8K7 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Smim1P0C8K7 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Smim1P0C8K7 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC10.82□□□□□ -0.68
Smim1P0C8K7 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
Smim1P0C8K7 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Smim1P0C8K7 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Smim1P0C8K7 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Smim1P0C8K7 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Smim1P0C8K7 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Smim1P0C8K7 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Smim1P0C8K7 Gm6139-201ENSMUST00000079261 882 ntBASIC10.82□□□□□ -0.68
Smim1P0C8K7 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Smim1P0C8K7 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Smim1P0C8K7 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Smim1P0C8K7 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC10.82□□□□□ -0.68
Smim1P0C8K7 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Smim1P0C8K7 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Smim1P0C8K7 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Smim1P0C8K7 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC10.82□□□□□ -0.68
Smim1P0C8K7 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Smim1P0C8K7 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Smim1P0C8K7 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Smim1P0C8K7 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Smim1P0C8K7 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Smim1P0C8K7 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Smim1P0C8K7 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Smim1P0C8K7 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC10.82□□□□□ -0.68
Smim1P0C8K7 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Smim1P0C8K7 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Smim1P0C8K7 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Smim1P0C8K7 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Smim1P0C8K7 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Smim1P0C8K7 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Smim1P0C8K7 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC10.81□□□□□ -0.68
Smim1P0C8K7 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Smim1P0C8K7 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC10.81□□□□□ -0.68
Smim1P0C8K7 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC10.81□□□□□ -0.68
Smim1P0C8K7 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Smim1P0C8K7 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Smim1P0C8K7 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC10.81□□□□□ -0.68
Smim1P0C8K7 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Smim1P0C8K7 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Smim1P0C8K7 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Smim1P0C8K7 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Smim1P0C8K7 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Smim1P0C8K7 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC10.81□□□□□ -0.68
Smim1P0C8K7 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Smim1P0C8K7 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Smim1P0C8K7 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Smim1P0C8K7 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC10.81□□□□□ -0.68
Smim1P0C8K7 Gm36967-201ENSMUST00000193814 266 ntBASIC10.81□□□□□ -0.68
Smim1P0C8K7 Ap3s1-204ENSMUST00000225520 957 ntBASIC10.81□□□□□ -0.68
Smim1P0C8K7 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Smim1P0C8K7 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Smim1P0C8K7 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Smim1P0C8K7 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Smim1P0C8K7 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Smim1P0C8K7 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Smim1P0C8K7 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Smim1P0C8K7 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Smim1P0C8K7 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Smim1P0C8K7 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms