Protein–RNA interactions for Protein: P09225

Lta, Lymphotoxin-alpha, mousemouse

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LtaP09225 Gm44443-201ENSMUST00000204396 5633 ntBASIC12.8□□□□□ -0.36
LtaP09225 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LtaP09225 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LtaP09225 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
LtaP09225 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
LtaP09225 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
LtaP09225 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LtaP09225 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LtaP09225 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LtaP09225 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LtaP09225 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
LtaP09225 Gm8784-201ENSMUST00000222096 1435 ntBASIC12.79□□□□□ -0.36
LtaP09225 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
LtaP09225 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LtaP09225 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LtaP09225 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LtaP09225 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
LtaP09225 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
LtaP09225 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LtaP09225 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
LtaP09225 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LtaP09225 Gm7862-201ENSMUST00000121461 292 ntBASIC12.79□□□□□ -0.36
LtaP09225 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC12.79□□□□□ -0.36
LtaP09225 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LtaP09225 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
LtaP09225 Gm37584-201ENSMUST00000193595 1290 ntBASIC12.79□□□□□ -0.36
LtaP09225 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC12.79□□□□□ -0.36
LtaP09225 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC12.79□□□□□ -0.36
LtaP09225 AC161829.1-201ENSMUST00000220298 281 ntBASIC12.79□□□□□ -0.36
LtaP09225 AC154757.1-201ENSMUST00000228289 336 ntBASIC12.79□□□□□ -0.36
LtaP09225 AC117588.1-201ENSMUST00000228510 999 ntBASIC12.79□□□□□ -0.36
LtaP09225 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LtaP09225 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC12.79□□□□□ -0.36
LtaP09225 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LtaP09225 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LtaP09225 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LtaP09225 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC12.79□□□□□ -0.36
LtaP09225 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
LtaP09225 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
LtaP09225 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
LtaP09225 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LtaP09225 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LtaP09225 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC12.79□□□□□ -0.36
LtaP09225 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LtaP09225 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
LtaP09225 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
LtaP09225 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
LtaP09225 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
LtaP09225 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
LtaP09225 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LtaP09225 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC12.78□□□□□ -0.36
LtaP09225 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
LtaP09225 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
LtaP09225 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LtaP09225 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
LtaP09225 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
LtaP09225 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
LtaP09225 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LtaP09225 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LtaP09225 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LtaP09225 Gm13418-201ENSMUST00000119097 944 ntBASIC12.78□□□□□ -0.36
LtaP09225 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
LtaP09225 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
LtaP09225 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
LtaP09225 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC12.78□□□□□ -0.36
LtaP09225 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC12.78□□□□□ -0.36
LtaP09225 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
LtaP09225 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
LtaP09225 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
LtaP09225 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC12.78□□□□□ -0.36
LtaP09225 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LtaP09225 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LtaP09225 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
LtaP09225 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC12.78□□□□□ -0.36
LtaP09225 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
LtaP09225 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
LtaP09225 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LtaP09225 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LtaP09225 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LtaP09225 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LtaP09225 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LtaP09225 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
LtaP09225 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
LtaP09225 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
LtaP09225 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
LtaP09225 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
LtaP09225 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
LtaP09225 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
LtaP09225 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
LtaP09225 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC12.77□□□□□ -0.36
LtaP09225 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
LtaP09225 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
LtaP09225 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC12.77□□□□□ -0.37
LtaP09225 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC12.77□□□□□ -0.37
LtaP09225 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC12.77□□□□□ -0.37
LtaP09225 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
LtaP09225 AC133598.3-202ENSMUST00000224219 531 ntBASIC12.77□□□□□ -0.37
LtaP09225 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC12.77□□□□□ -0.37
LtaP09225 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
LtaP09225 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms