Protein–RNA interactions for Protein: P08775

Polr2a, DNA-directed RNA polymerase II subunit RPB1, mousemouse

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr2aP08775 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Polr2aP08775 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Polr2aP08775 Gm15487-201ENSMUST00000122373 465 ntBASIC17.71■□□□□ 0.43
Polr2aP08775 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Polr2aP08775 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC17.71■□□□□ 0.43
Polr2aP08775 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Polr2aP08775 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Polr2aP08775 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Polr2aP08775 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC17.71■□□□□ 0.43
Polr2aP08775 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.42
Polr2aP08775 Gm43702-201ENSMUST00000198772 2546 ntBASIC17.7■□□□□ 0.42
Polr2aP08775 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC17.7■□□□□ 0.42
Polr2aP08775 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Polr2aP08775 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC17.7■□□□□ 0.42
Polr2aP08775 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Polr2aP08775 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Polr2aP08775 Gm6218-201ENSMUST00000219812 628 ntBASIC17.7■□□□□ 0.42
Polr2aP08775 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Polr2aP08775 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Polr2aP08775 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Polr2aP08775 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Polr2aP08775 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Polr2aP08775 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Polr2aP08775 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC17.7■□□□□ 0.42
Polr2aP08775 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Polr2aP08775 Ighv8-7-201ENSMUST00000194349 297 ntBASIC17.7■□□□□ 0.42
Polr2aP08775 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Polr2aP08775 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
Polr2aP08775 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Polr2aP08775 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Polr2aP08775 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Polr2aP08775 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Polr2aP08775 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Polr2aP08775 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Polr2aP08775 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC17.69■□□□□ 0.42
Polr2aP08775 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Polr2aP08775 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC17.69■□□□□ 0.42
Polr2aP08775 Cdk7-205ENSMUST00000225990 1159 ntBASIC17.69■□□□□ 0.42
Polr2aP08775 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Polr2aP08775 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Polr2aP08775 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Polr2aP08775 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Polr2aP08775 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
Polr2aP08775 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC17.68■□□□□ 0.42
Polr2aP08775 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Polr2aP08775 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC17.68■□□□□ 0.42
Polr2aP08775 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Polr2aP08775 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC17.68■□□□□ 0.42
Polr2aP08775 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Polr2aP08775 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Polr2aP08775 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Polr2aP08775 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC17.68■□□□□ 0.42
Polr2aP08775 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Polr2aP08775 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Polr2aP08775 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Polr2aP08775 Gm25144-201ENSMUST00000179561 110 ntBASIC17.68■□□□□ 0.42
Polr2aP08775 Gm25352-201ENSMUST00000179815 110 ntBASIC17.68■□□□□ 0.42
Polr2aP08775 AC132467.2-202ENSMUST00000227726 559 ntBASIC17.68■□□□□ 0.42
Polr2aP08775 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Polr2aP08775 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Polr2aP08775 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Polr2aP08775 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Polr2aP08775 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Polr2aP08775 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Polr2aP08775 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Polr2aP08775 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Polr2aP08775 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Polr2aP08775 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC17.67■□□□□ 0.42
Polr2aP08775 Gm27533-201ENSMUST00000183800 152 ntBASIC17.67■□□□□ 0.42
Polr2aP08775 Gm9063-201ENSMUST00000223299 582 ntBASIC17.67■□□□□ 0.42
Polr2aP08775 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Polr2aP08775 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Polr2aP08775 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Polr2aP08775 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Polr2aP08775 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC17.67■□□□□ 0.42
Polr2aP08775 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC17.67■□□□□ 0.42
Polr2aP08775 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Polr2aP08775 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Polr2aP08775 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
Polr2aP08775 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Polr2aP08775 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Polr2aP08775 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Polr2aP08775 Gm38327-201ENSMUST00000195852 1755 ntBASIC17.66■□□□□ 0.42
Polr2aP08775 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Polr2aP08775 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Polr2aP08775 Gm24694-201ENSMUST00000180054 110 ntBASIC17.66■□□□□ 0.42
Polr2aP08775 Gm27663-201ENSMUST00000184839 110 ntBASIC17.66■□□□□ 0.42
Polr2aP08775 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Polr2aP08775 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Polr2aP08775 Gm42612-201ENSMUST00000197986 623 ntBASIC17.66■□□□□ 0.42
Polr2aP08775 Gm43170-201ENSMUST00000199827 612 ntBASIC17.66■□□□□ 0.42
Polr2aP08775 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Polr2aP08775 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Polr2aP08775 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC17.66■□□□□ 0.42
Polr2aP08775 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Polr2aP08775 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Polr2aP08775 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Polr2aP08775 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC17.66■□□□□ 0.42
Polr2aP08775 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Polr2aP08775 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms