Protein–RNA interactions for Protein: P08226

Apoe, Apolipoprotein E, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ApoeP08226 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
ApoeP08226 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
ApoeP08226 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
ApoeP08226 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
ApoeP08226 Gm9768-201ENSMUST00000206007 2861 ntBASIC14.85□□□□□ -0.03
ApoeP08226 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
ApoeP08226 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
ApoeP08226 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
ApoeP08226 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
ApoeP08226 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC14.85□□□□□ -0.03
ApoeP08226 Gm2274-201ENSMUST00000184539 609 ntBASIC14.85□□□□□ -0.03
ApoeP08226 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC14.85□□□□□ -0.03
ApoeP08226 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
ApoeP08226 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
ApoeP08226 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
ApoeP08226 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
ApoeP08226 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
ApoeP08226 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
ApoeP08226 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
ApoeP08226 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
ApoeP08226 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC14.85□□□□□ -0.03
ApoeP08226 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
ApoeP08226 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
ApoeP08226 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
ApoeP08226 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
ApoeP08226 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
ApoeP08226 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
ApoeP08226 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
ApoeP08226 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
ApoeP08226 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
ApoeP08226 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
ApoeP08226 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
ApoeP08226 Gm13168-201ENSMUST00000121771 632 ntBASIC14.84□□□□□ -0.03
ApoeP08226 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC14.84□□□□□ -0.03
ApoeP08226 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC14.84□□□□□ -0.03
ApoeP08226 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
ApoeP08226 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC14.84□□□□□ -0.03
ApoeP08226 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC14.84□□□□□ -0.03
ApoeP08226 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC14.84□□□□□ -0.03
ApoeP08226 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
ApoeP08226 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC14.84□□□□□ -0.03
ApoeP08226 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
ApoeP08226 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
ApoeP08226 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
ApoeP08226 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC14.84□□□□□ -0.03
ApoeP08226 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
ApoeP08226 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
ApoeP08226 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
ApoeP08226 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
ApoeP08226 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
ApoeP08226 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
ApoeP08226 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
ApoeP08226 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
ApoeP08226 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
ApoeP08226 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
ApoeP08226 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
ApoeP08226 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
ApoeP08226 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
ApoeP08226 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
ApoeP08226 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
ApoeP08226 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
ApoeP08226 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
ApoeP08226 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
ApoeP08226 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC14.83□□□□□ -0.04
ApoeP08226 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
ApoeP08226 Gm10653-202ENSMUST00000139570 835 ntBASIC14.83□□□□□ -0.04
ApoeP08226 Gm6257-201ENSMUST00000163864 910 ntBASIC14.83□□□□□ -0.04
ApoeP08226 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
ApoeP08226 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC14.83□□□□□ -0.04
ApoeP08226 AC122351.1-201ENSMUST00000220467 126 ntBASIC14.83□□□□□ -0.04
ApoeP08226 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
ApoeP08226 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
ApoeP08226 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
ApoeP08226 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC14.83□□□□□ -0.04
ApoeP08226 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
ApoeP08226 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC14.83□□□□□ -0.04
ApoeP08226 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
ApoeP08226 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
ApoeP08226 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
ApoeP08226 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
ApoeP08226 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
ApoeP08226 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
ApoeP08226 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
ApoeP08226 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
ApoeP08226 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ApoeP08226 Gm37728-201ENSMUST00000195025 2292 ntBASIC14.82□□□□□ -0.04
ApoeP08226 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ApoeP08226 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ApoeP08226 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
ApoeP08226 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ApoeP08226 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
ApoeP08226 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ApoeP08226 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
ApoeP08226 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
ApoeP08226 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ApoeP08226 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC14.82□□□□□ -0.04
ApoeP08226 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ApoeP08226 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC14.82□□□□□ -0.04
ApoeP08226 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
ApoeP08226 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 49.9 ms