Protein–RNA interactions for Protein: P02463

Col4a1, Collagen alpha-1(IV) chain, mousemouse

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1P02463 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
Col4a1P02463 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Col4a1P02463 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Col4a1P02463 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Col4a1P02463 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC19.11■□□□□ 0.65
Col4a1P02463 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Col4a1P02463 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Col4a1P02463 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Col4a1P02463 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Col4a1P02463 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC19.11■□□□□ 0.65
Col4a1P02463 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC19.11■□□□□ 0.65
Col4a1P02463 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Col4a1P02463 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC19.11■□□□□ 0.65
Col4a1P02463 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Col4a1P02463 Gm29541-201ENSMUST00000191351 678 ntBASIC19.11■□□□□ 0.65
Col4a1P02463 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Col4a1P02463 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Col4a1P02463 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Col4a1P02463 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC19.11■□□□□ 0.65
Col4a1P02463 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Col4a1P02463 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Col4a1P02463 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Col4a1P02463 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Col4a1P02463 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC19.1■□□□□ 0.65
Col4a1P02463 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Col4a1P02463 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Col4a1P02463 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Col4a1P02463 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Col4a1P02463 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Col4a1P02463 Gm42473-201ENSMUST00000201056 2291 ntBASIC19.1■□□□□ 0.65
Col4a1P02463 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Col4a1P02463 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC19.1■□□□□ 0.65
Col4a1P02463 Mir7023-201ENSMUST00000185093 64 ntBASIC19.1■□□□□ 0.65
Col4a1P02463 Gm7774-201ENSMUST00000200064 533 ntBASIC19.1■□□□□ 0.65
Col4a1P02463 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC19.1■□□□□ 0.65
Col4a1P02463 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Col4a1P02463 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Col4a1P02463 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC19.1■□□□□ 0.65
Col4a1P02463 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC19.09■□□□□ 0.65
Col4a1P02463 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Col4a1P02463 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC19.09■□□□□ 0.65
Col4a1P02463 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC19.09■□□□□ 0.65
Col4a1P02463 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC19.09■□□□□ 0.65
Col4a1P02463 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Col4a1P02463 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC19.09■□□□□ 0.65
Col4a1P02463 Gm5779-201ENSMUST00000218467 910 ntBASIC19.09■□□□□ 0.65
Col4a1P02463 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC19.09■□□□□ 0.65
Col4a1P02463 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Col4a1P02463 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC19.09■□□□□ 0.65
Col4a1P02463 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC19.09■□□□□ 0.65
Col4a1P02463 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Col4a1P02463 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Col4a1P02463 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Col4a1P02463 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Col4a1P02463 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Col4a1P02463 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Col4a1P02463 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC19.09■□□□□ 0.65
Col4a1P02463 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Col4a1P02463 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Col4a1P02463 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Col4a1P02463 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Col4a1P02463 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
Col4a1P02463 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Col4a1P02463 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC19.08■□□□□ 0.65
Col4a1P02463 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC19.08■□□□□ 0.65
Col4a1P02463 Gm18057-201ENSMUST00000208220 503 ntBASIC19.08■□□□□ 0.65
Col4a1P02463 Wdyhv1-206ENSMUST00000227142 786 ntBASIC19.08■□□□□ 0.65
Col4a1P02463 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Col4a1P02463 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Col4a1P02463 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
Col4a1P02463 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Col4a1P02463 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Col4a1P02463 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Col4a1P02463 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Col4a1P02463 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Col4a1P02463 AC153526.5-201ENSMUST00000218661 2147 ntBASIC19.08■□□□□ 0.64
Col4a1P02463 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC19.08■□□□□ 0.64
Col4a1P02463 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC19.08■□□□□ 0.64
Col4a1P02463 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC19.08■□□□□ 0.64
Col4a1P02463 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC19.08■□□□□ 0.64
Col4a1P02463 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Col4a1P02463 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Col4a1P02463 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Col4a1P02463 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Col4a1P02463 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC19.07■□□□□ 0.64
Col4a1P02463 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Col4a1P02463 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Col4a1P02463 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Col4a1P02463 Gm13015-201ENSMUST00000118674 204 ntBASIC19.07■□□□□ 0.64
Col4a1P02463 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC19.07■□□□□ 0.64
Col4a1P02463 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Col4a1P02463 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC19.07■□□□□ 0.64
Col4a1P02463 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
Col4a1P02463 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Col4a1P02463 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Col4a1P02463 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Col4a1P02463 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Col4a1P02463 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Col4a1P02463 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Col4a1P02463 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms