Protein–RNA interactions for Protein: O88895

Hdac3, Histone deacetylase 3, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac3O88895 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Hdac3O88895 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hdac3O88895 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hdac3O88895 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hdac3O88895 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC14.05□□□□□ -0.16
Hdac3O88895 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Hdac3O88895 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC14.05□□□□□ -0.16
Hdac3O88895 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC14.05□□□□□ -0.16
Hdac3O88895 Gm27528-202ENSMUST00000222916 2012 ntBASIC14.05□□□□□ -0.16
Hdac3O88895 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hdac3O88895 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hdac3O88895 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hdac3O88895 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Hdac3O88895 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hdac3O88895 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hdac3O88895 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Hdac3O88895 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Hdac3O88895 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hdac3O88895 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Hdac3O88895 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hdac3O88895 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC14.04□□□□□ -0.16
Hdac3O88895 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Hdac3O88895 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Hdac3O88895 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hdac3O88895 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hdac3O88895 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hdac3O88895 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hdac3O88895 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Hdac3O88895 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Hdac3O88895 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hdac3O88895 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Hdac3O88895 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Hdac3O88895 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hdac3O88895 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hdac3O88895 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hdac3O88895 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hdac3O88895 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC14.04□□□□□ -0.16
Hdac3O88895 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hdac3O88895 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Hdac3O88895 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hdac3O88895 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hdac3O88895 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hdac3O88895 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC14.03□□□□□ -0.16
Hdac3O88895 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Hdac3O88895 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hdac3O88895 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Hdac3O88895 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC14.03□□□□□ -0.16
Hdac3O88895 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
Hdac3O88895 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
Hdac3O88895 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Hdac3O88895 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hdac3O88895 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hdac3O88895 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hdac3O88895 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hdac3O88895 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hdac3O88895 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hdac3O88895 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hdac3O88895 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hdac3O88895 AC163637.1-201ENSMUST00000215491 1894 ntBASIC14.03□□□□□ -0.16
Hdac3O88895 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC14.03□□□□□ -0.16
Hdac3O88895 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
Hdac3O88895 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Hdac3O88895 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hdac3O88895 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Hdac3O88895 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hdac3O88895 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Hdac3O88895 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hdac3O88895 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hdac3O88895 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hdac3O88895 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Hdac3O88895 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Hdac3O88895 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Hdac3O88895 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Hdac3O88895 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Hdac3O88895 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Hdac3O88895 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC14.02□□□□□ -0.16
Hdac3O88895 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Hdac3O88895 Zkscan4-202ENSMUST00000225845 1506 ntBASIC14.02□□□□□ -0.16
Hdac3O88895 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Hdac3O88895 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Hdac3O88895 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hdac3O88895 Gm14464-201ENSMUST00000119658 1254 ntBASIC14.02□□□□□ -0.17
Hdac3O88895 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hdac3O88895 Gm6345-202ENSMUST00000180900 204 ntBASIC14.02□□□□□ -0.17
Hdac3O88895 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC14.02□□□□□ -0.17
Hdac3O88895 Gm17808-201ENSMUST00000200859 894 ntBASIC14.02□□□□□ -0.17
Hdac3O88895 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hdac3O88895 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Hdac3O88895 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hdac3O88895 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hdac3O88895 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Hdac3O88895 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hdac3O88895 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hdac3O88895 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Hdac3O88895 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hdac3O88895 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hdac3O88895 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Hdac3O88895 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC14.02□□□□□ -0.17
Hdac3O88895 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hdac3O88895 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 50 ms