Protein–RNA interactions for Protein: O88879

Apaf1, Apoptotic protease-activating factor 1, mousemouse

Predictions only

Length 1,249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Apaf1O88879 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Apaf1O88879 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Apaf1O88879 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Apaf1O88879 Gm11185-201ENSMUST00000117732 1007 ntBASIC20.34■□□□□ 0.85
Apaf1O88879 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC20.34■□□□□ 0.85
Apaf1O88879 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC20.34■□□□□ 0.85
Apaf1O88879 AC154222.1-201ENSMUST00000223882 475 ntBASIC20.34■□□□□ 0.85
Apaf1O88879 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Apaf1O88879 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Apaf1O88879 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC20.34■□□□□ 0.85
Apaf1O88879 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC20.34■□□□□ 0.85
Apaf1O88879 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Apaf1O88879 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Apaf1O88879 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Apaf1O88879 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Apaf1O88879 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Apaf1O88879 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Apaf1O88879 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Apaf1O88879 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Apaf1O88879 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Apaf1O88879 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC20.33■□□□□ 0.85
Apaf1O88879 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC20.33■□□□□ 0.85
Apaf1O88879 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Apaf1O88879 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Apaf1O88879 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Apaf1O88879 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Apaf1O88879 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Apaf1O88879 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Apaf1O88879 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC20.33■□□□□ 0.85
Apaf1O88879 Gm45167-201ENSMUST00000208007 322 ntBASIC20.33■□□□□ 0.85
Apaf1O88879 AC159093.1-201ENSMUST00000227779 380 ntBASIC20.33■□□□□ 0.85
Apaf1O88879 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Apaf1O88879 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
Apaf1O88879 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Apaf1O88879 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Apaf1O88879 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Apaf1O88879 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Apaf1O88879 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Apaf1O88879 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Apaf1O88879 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Apaf1O88879 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Apaf1O88879 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC20.32■□□□□ 0.84
Apaf1O88879 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Apaf1O88879 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC20.32■□□□□ 0.84
Apaf1O88879 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Apaf1O88879 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Apaf1O88879 Gm18206-201ENSMUST00000207027 926 ntBASIC20.32■□□□□ 0.84
Apaf1O88879 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Apaf1O88879 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Apaf1O88879 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Apaf1O88879 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Apaf1O88879 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Apaf1O88879 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC20.32■□□□□ 0.84
Apaf1O88879 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Apaf1O88879 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC20.32■□□□□ 0.84
Apaf1O88879 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Apaf1O88879 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Apaf1O88879 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Apaf1O88879 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Apaf1O88879 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC20.31■□□□□ 0.84
Apaf1O88879 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC20.31■□□□□ 0.84
Apaf1O88879 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC20.31■□□□□ 0.84
Apaf1O88879 Gm4899-201ENSMUST00000178708 719 ntBASIC20.31■□□□□ 0.84
Apaf1O88879 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC20.31■□□□□ 0.84
Apaf1O88879 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC20.31■□□□□ 0.84
Apaf1O88879 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC20.31■□□□□ 0.84
Apaf1O88879 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Apaf1O88879 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC20.31■□□□□ 0.84
Apaf1O88879 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC20.31■□□□□ 0.84
Apaf1O88879 Gm5364-201ENSMUST00000216789 889 ntBASIC20.31■□□□□ 0.84
Apaf1O88879 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Apaf1O88879 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC20.31■□□□□ 0.84
Apaf1O88879 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Apaf1O88879 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Apaf1O88879 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Apaf1O88879 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC20.31■□□□□ 0.84
Apaf1O88879 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Apaf1O88879 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Apaf1O88879 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Apaf1O88879 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Apaf1O88879 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Apaf1O88879 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Apaf1O88879 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Apaf1O88879 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Apaf1O88879 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC20.3■□□□□ 0.84
Apaf1O88879 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC20.3■□□□□ 0.84
Apaf1O88879 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC20.3■□□□□ 0.84
Apaf1O88879 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Apaf1O88879 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Apaf1O88879 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Apaf1O88879 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Apaf1O88879 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Apaf1O88879 Gm42901-201ENSMUST00000197735 3171 ntBASIC20.3■□□□□ 0.84
Apaf1O88879 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Apaf1O88879 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC20.3■□□□□ 0.84
Apaf1O88879 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Apaf1O88879 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Apaf1O88879 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Apaf1O88879 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Apaf1O88879 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms