Protein–RNA interactions for Protein: O88543

Cops3, COP9 signalosome complex subunit 3, mousemouse

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops3O88543 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Cops3O88543 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cops3O88543 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
Cops3O88543 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC14.07□□□□□ -0.16
Cops3O88543 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Cops3O88543 Gm21559-201ENSMUST00000220638 855 ntBASIC14.07□□□□□ -0.16
Cops3O88543 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cops3O88543 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Cops3O88543 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
Cops3O88543 Gm8587-201ENSMUST00000076538 843 ntBASIC14.07□□□□□ -0.16
Cops3O88543 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cops3O88543 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cops3O88543 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cops3O88543 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Cops3O88543 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Cops3O88543 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Cops3O88543 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cops3O88543 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC14.07□□□□□ -0.16
Cops3O88543 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Cops3O88543 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Cops3O88543 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cops3O88543 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cops3O88543 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cops3O88543 Gm8668-201ENSMUST00000120559 1447 ntBASIC14.07□□□□□ -0.16
Cops3O88543 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cops3O88543 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cops3O88543 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cops3O88543 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cops3O88543 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cops3O88543 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Cops3O88543 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Cops3O88543 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Cops3O88543 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
Cops3O88543 Gm10052-201ENSMUST00000168019 960 ntBASIC14.06□□□□□ -0.16
Cops3O88543 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cops3O88543 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC14.06□□□□□ -0.16
Cops3O88543 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cops3O88543 Gm7729-201ENSMUST00000050143 801 ntBASIC14.06□□□□□ -0.16
Cops3O88543 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Cops3O88543 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cops3O88543 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cops3O88543 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cops3O88543 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cops3O88543 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cops3O88543 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC14.06□□□□□ -0.16
Cops3O88543 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cops3O88543 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cops3O88543 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Cops3O88543 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cops3O88543 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cops3O88543 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Cops3O88543 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC14.05□□□□□ -0.16
Cops3O88543 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cops3O88543 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Cops3O88543 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cops3O88543 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC14.05□□□□□ -0.16
Cops3O88543 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cops3O88543 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC14.05□□□□□ -0.16
Cops3O88543 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Cops3O88543 Gm27389-201ENSMUST00000183622 195 ntBASIC14.05□□□□□ -0.16
Cops3O88543 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC14.05□□□□□ -0.16
Cops3O88543 Gm44430-201ENSMUST00000203376 995 ntBASIC14.05□□□□□ -0.16
Cops3O88543 AC134329.2-201ENSMUST00000217897 428 ntBASIC14.05□□□□□ -0.16
Cops3O88543 AC112142.1-201ENSMUST00000228796 918 ntBASIC14.05□□□□□ -0.16
Cops3O88543 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Cops3O88543 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cops3O88543 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Cops3O88543 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cops3O88543 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cops3O88543 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cops3O88543 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cops3O88543 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cops3O88543 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cops3O88543 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC14.05□□□□□ -0.16
Cops3O88543 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cops3O88543 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cops3O88543 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cops3O88543 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Cops3O88543 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cops3O88543 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cops3O88543 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cops3O88543 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cops3O88543 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cops3O88543 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cops3O88543 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cops3O88543 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Cops3O88543 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cops3O88543 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cops3O88543 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cops3O88543 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC14.04□□□□□ -0.16
Cops3O88543 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC14.04□□□□□ -0.16
Cops3O88543 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Cops3O88543 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Cops3O88543 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cops3O88543 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cops3O88543 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cops3O88543 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Cops3O88543 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cops3O88543 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cops3O88543 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC14.04□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms