Protein–RNA interactions for Protein: O88520

Shoc2, Leucine-rich repeat protein SHOC-2, mousemouse

Known RBP Predictions only

Length 582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shoc2O88520 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Shoc2O88520 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC16.2■□□□□ 0.18
Shoc2O88520 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Shoc2O88520 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Shoc2O88520 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC16.19■□□□□ 0.18
Shoc2O88520 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Shoc2O88520 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Shoc2O88520 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Shoc2O88520 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Shoc2O88520 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Shoc2O88520 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Shoc2O88520 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Shoc2O88520 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Shoc2O88520 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC16.19■□□□□ 0.18
Shoc2O88520 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Shoc2O88520 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC16.19■□□□□ 0.18
Shoc2O88520 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC16.19■□□□□ 0.18
Shoc2O88520 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC16.19■□□□□ 0.18
Shoc2O88520 Gm7507-201ENSMUST00000183053 1008 ntBASIC16.19■□□□□ 0.18
Shoc2O88520 Mir6404-201ENSMUST00000183699 94 ntBASIC16.19■□□□□ 0.18
Shoc2O88520 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Shoc2O88520 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC16.19■□□□□ 0.18
Shoc2O88520 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Shoc2O88520 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Shoc2O88520 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Shoc2O88520 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Shoc2O88520 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Shoc2O88520 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Shoc2O88520 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Shoc2O88520 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Shoc2O88520 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Shoc2O88520 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Shoc2O88520 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC16.19■□□□□ 0.18
Shoc2O88520 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Shoc2O88520 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Shoc2O88520 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
Shoc2O88520 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Shoc2O88520 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Shoc2O88520 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Shoc2O88520 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Shoc2O88520 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Shoc2O88520 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC16.18■□□□□ 0.18
Shoc2O88520 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Shoc2O88520 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Shoc2O88520 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC16.18■□□□□ 0.18
Shoc2O88520 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Shoc2O88520 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC16.18■□□□□ 0.18
Shoc2O88520 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC16.18■□□□□ 0.18
Shoc2O88520 Gm27867-201ENSMUST00000184778 125 ntBASIC16.18■□□□□ 0.18
Shoc2O88520 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Shoc2O88520 Gm44454-201ENSMUST00000198541 138 ntBASIC16.18■□□□□ 0.18
Shoc2O88520 AC153889.1-201ENSMUST00000219257 330 ntBASIC16.18■□□□□ 0.18
Shoc2O88520 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Shoc2O88520 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Shoc2O88520 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Shoc2O88520 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
Shoc2O88520 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Shoc2O88520 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC16.18■□□□□ 0.18
Shoc2O88520 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Shoc2O88520 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Shoc2O88520 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Shoc2O88520 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Shoc2O88520 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Shoc2O88520 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Shoc2O88520 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Shoc2O88520 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Shoc2O88520 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Shoc2O88520 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC16.18■□□□□ 0.18
Shoc2O88520 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Shoc2O88520 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Shoc2O88520 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Shoc2O88520 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Shoc2O88520 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Shoc2O88520 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Shoc2O88520 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Shoc2O88520 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Shoc2O88520 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Shoc2O88520 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Shoc2O88520 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Shoc2O88520 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Shoc2O88520 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
Shoc2O88520 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Shoc2O88520 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Shoc2O88520 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Shoc2O88520 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Shoc2O88520 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Shoc2O88520 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC16.17■□□□□ 0.18
Shoc2O88520 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Shoc2O88520 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Shoc2O88520 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC16.17■□□□□ 0.18
Shoc2O88520 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Shoc2O88520 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Shoc2O88520 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Shoc2O88520 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Shoc2O88520 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Shoc2O88520 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Shoc2O88520 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Shoc2O88520 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Shoc2O88520 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Shoc2O88520 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms