Protein–RNA interactions for Protein: O88351

Ikbkb, Inhibitor of nuclear factor kappa-B kinase subunit beta, mousemouse

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IkbkbO88351 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
IkbkbO88351 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
IkbkbO88351 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
IkbkbO88351 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
IkbkbO88351 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC17.32■□□□□ 0.36
IkbkbO88351 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC17.32■□□□□ 0.36
IkbkbO88351 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
IkbkbO88351 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC17.32■□□□□ 0.36
IkbkbO88351 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
IkbkbO88351 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
IkbkbO88351 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
IkbkbO88351 Rbfox2-206ENSMUST00000227314 1810 ntBASIC17.32■□□□□ 0.36
IkbkbO88351 Asic1-205ENSMUST00000228185 1818 ntBASIC17.32■□□□□ 0.36
IkbkbO88351 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
IkbkbO88351 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
IkbkbO88351 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC17.32■□□□□ 0.36
IkbkbO88351 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
IkbkbO88351 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
IkbkbO88351 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
IkbkbO88351 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
IkbkbO88351 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
IkbkbO88351 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
IkbkbO88351 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
IkbkbO88351 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
IkbkbO88351 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
IkbkbO88351 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
IkbkbO88351 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
IkbkbO88351 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
IkbkbO88351 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
IkbkbO88351 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
IkbkbO88351 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
IkbkbO88351 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC17.31■□□□□ 0.36
IkbkbO88351 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
IkbkbO88351 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
IkbkbO88351 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
IkbkbO88351 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
IkbkbO88351 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
IkbkbO88351 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
IkbkbO88351 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
IkbkbO88351 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
IkbkbO88351 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC17.31■□□□□ 0.36
IkbkbO88351 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
IkbkbO88351 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
IkbkbO88351 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
IkbkbO88351 AC132265.1-201ENSMUST00000219233 1665 ntBASIC17.3■□□□□ 0.36
IkbkbO88351 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
IkbkbO88351 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
IkbkbO88351 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
IkbkbO88351 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC17.3■□□□□ 0.36
IkbkbO88351 Gm13830-205ENSMUST00000201195 1155 ntBASIC17.3■□□□□ 0.36
IkbkbO88351 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC17.3■□□□□ 0.36
IkbkbO88351 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC17.3■□□□□ 0.36
IkbkbO88351 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
IkbkbO88351 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
IkbkbO88351 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
IkbkbO88351 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
IkbkbO88351 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
IkbkbO88351 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
IkbkbO88351 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
IkbkbO88351 Gm6858-201ENSMUST00000208582 1468 ntBASIC17.3■□□□□ 0.36
IkbkbO88351 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
IkbkbO88351 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
IkbkbO88351 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
IkbkbO88351 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
IkbkbO88351 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
IkbkbO88351 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
IkbkbO88351 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC17.29■□□□□ 0.36
IkbkbO88351 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC17.29■□□□□ 0.36
IkbkbO88351 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
IkbkbO88351 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
IkbkbO88351 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
IkbkbO88351 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
IkbkbO88351 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC17.29■□□□□ 0.36
IkbkbO88351 Gm7506-201ENSMUST00000207758 815 ntBASIC17.29■□□□□ 0.36
IkbkbO88351 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
IkbkbO88351 Rps4l-201ENSMUST00000071745 943 ntBASIC17.29■□□□□ 0.36
IkbkbO88351 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
IkbkbO88351 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
IkbkbO88351 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
IkbkbO88351 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
IkbkbO88351 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
IkbkbO88351 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
IkbkbO88351 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
IkbkbO88351 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
IkbkbO88351 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
IkbkbO88351 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
IkbkbO88351 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
IkbkbO88351 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
IkbkbO88351 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
IkbkbO88351 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
IkbkbO88351 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
IkbkbO88351 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
IkbkbO88351 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
IkbkbO88351 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC17.28■□□□□ 0.36
IkbkbO88351 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
IkbkbO88351 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
IkbkbO88351 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
IkbkbO88351 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
IkbkbO88351 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
IkbkbO88351 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms