Protein–RNA interactions for Protein: O55055

Trdmt1, tRNA (cytosine(38)-C(5))-methyltransferase, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdmt1O55055 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Trdmt1O55055 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Trdmt1O55055 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Trdmt1O55055 Gm38327-201ENSMUST00000195852 1755 ntBASIC17.19■□□□□ 0.34
Trdmt1O55055 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Trdmt1O55055 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trdmt1O55055 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Trdmt1O55055 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Trdmt1O55055 AC121598.2-201ENSMUST00000228376 2325 ntBASIC17.19■□□□□ 0.34
Trdmt1O55055 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trdmt1O55055 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Trdmt1O55055 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Trdmt1O55055 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Trdmt1O55055 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trdmt1O55055 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trdmt1O55055 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
Trdmt1O55055 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trdmt1O55055 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trdmt1O55055 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC17.18■□□□□ 0.34
Trdmt1O55055 Gm14722-201ENSMUST00000118943 689 ntBASIC17.18■□□□□ 0.34
Trdmt1O55055 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC17.18■□□□□ 0.34
Trdmt1O55055 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC17.18■□□□□ 0.34
Trdmt1O55055 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trdmt1O55055 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Trdmt1O55055 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Trdmt1O55055 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trdmt1O55055 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Trdmt1O55055 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trdmt1O55055 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trdmt1O55055 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trdmt1O55055 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trdmt1O55055 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trdmt1O55055 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trdmt1O55055 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Trdmt1O55055 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trdmt1O55055 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trdmt1O55055 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trdmt1O55055 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trdmt1O55055 Gm7669-201ENSMUST00000210184 1603 ntBASIC17.18■□□□□ 0.34
Trdmt1O55055 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trdmt1O55055 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Trdmt1O55055 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trdmt1O55055 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trdmt1O55055 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trdmt1O55055 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trdmt1O55055 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trdmt1O55055 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trdmt1O55055 Gm13410-201ENSMUST00000117058 1415 ntBASIC17.17■□□□□ 0.34
Trdmt1O55055 Gm13337-201ENSMUST00000119183 1594 ntBASIC17.17■□□□□ 0.34
Trdmt1O55055 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Trdmt1O55055 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC17.17■□□□□ 0.34
Trdmt1O55055 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC17.17■□□□□ 0.34
Trdmt1O55055 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC17.17■□□□□ 0.34
Trdmt1O55055 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Trdmt1O55055 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Trdmt1O55055 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC17.17■□□□□ 0.34
Trdmt1O55055 AC140397.2-201ENSMUST00000224213 834 ntBASIC17.17■□□□□ 0.34
Trdmt1O55055 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trdmt1O55055 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Trdmt1O55055 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trdmt1O55055 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Trdmt1O55055 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trdmt1O55055 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Trdmt1O55055 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trdmt1O55055 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Trdmt1O55055 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trdmt1O55055 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Trdmt1O55055 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trdmt1O55055 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trdmt1O55055 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trdmt1O55055 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC17.16■□□□□ 0.34
Trdmt1O55055 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC17.16■□□□□ 0.34
Trdmt1O55055 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC17.16■□□□□ 0.34
Trdmt1O55055 AC160980.1-201ENSMUST00000224136 970 ntBASIC17.16■□□□□ 0.34
Trdmt1O55055 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trdmt1O55055 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Trdmt1O55055 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC17.16■□□□□ 0.34
Trdmt1O55055 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trdmt1O55055 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
Trdmt1O55055 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Trdmt1O55055 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trdmt1O55055 Gm44729-201ENSMUST00000206759 2052 ntBASIC17.16■□□□□ 0.34
Trdmt1O55055 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trdmt1O55055 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Trdmt1O55055 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC17.15■□□□□ 0.34
Trdmt1O55055 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trdmt1O55055 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Trdmt1O55055 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trdmt1O55055 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trdmt1O55055 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trdmt1O55055 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trdmt1O55055 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trdmt1O55055 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC17.15■□□□□ 0.34
Trdmt1O55055 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trdmt1O55055 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC17.15■□□□□ 0.34
Trdmt1O55055 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trdmt1O55055 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Trdmt1O55055 Gm2272-201ENSMUST00000194903 582 ntBASIC17.15■□□□□ 0.34
Trdmt1O55055 Gm43125-201ENSMUST00000201724 730 ntBASIC17.15■□□□□ 0.34
Trdmt1O55055 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC17.15■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms