Protein–RNA interactions for Protein: O54962

Banf1, Barrier-to-autointegration factor, mousemouse

Predictions only

Length 89 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Banf1O54962 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC15.98■□□□□ 0.15
Banf1O54962 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC15.98■□□□□ 0.15
Banf1O54962 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Banf1O54962 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Banf1O54962 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Banf1O54962 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Banf1O54962 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Banf1O54962 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Banf1O54962 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Banf1O54962 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Banf1O54962 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Banf1O54962 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Banf1O54962 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Banf1O54962 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Banf1O54962 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Banf1O54962 Gm10584-201ENSMUST00000207036 2628 ntBASIC15.98■□□□□ 0.15
Banf1O54962 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Banf1O54962 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Banf1O54962 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
Banf1O54962 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Banf1O54962 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
Banf1O54962 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Banf1O54962 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Banf1O54962 Gm10013-201ENSMUST00000106074 672 ntBASIC15.97■□□□□ 0.15
Banf1O54962 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC15.97■□□□□ 0.15
Banf1O54962 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC15.97■□□□□ 0.15
Banf1O54962 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Banf1O54962 AC125350.1-201ENSMUST00000225115 903 ntBASIC15.97■□□□□ 0.15
Banf1O54962 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Banf1O54962 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Banf1O54962 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Banf1O54962 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Banf1O54962 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Banf1O54962 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Banf1O54962 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC15.96■□□□□ 0.15
Banf1O54962 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC15.96■□□□□ 0.15
Banf1O54962 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Banf1O54962 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
Banf1O54962 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC15.96■□□□□ 0.15
Banf1O54962 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC15.96■□□□□ 0.15
Banf1O54962 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
Banf1O54962 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Banf1O54962 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC15.96■□□□□ 0.15
Banf1O54962 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
Banf1O54962 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Banf1O54962 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC15.96■□□□□ 0.15
Banf1O54962 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Banf1O54962 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC15.96■□□□□ 0.14
Banf1O54962 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.14
Banf1O54962 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.14
Banf1O54962 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Banf1O54962 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.14
Banf1O54962 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Banf1O54962 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
Banf1O54962 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Banf1O54962 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Banf1O54962 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Banf1O54962 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Banf1O54962 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Banf1O54962 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Banf1O54962 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Banf1O54962 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
Banf1O54962 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Banf1O54962 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Banf1O54962 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Banf1O54962 Gm10231-201ENSMUST00000181584 441 ntBASIC15.95■□□□□ 0.14
Banf1O54962 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Banf1O54962 Gm10175-202ENSMUST00000208752 441 ntBASIC15.95■□□□□ 0.14
Banf1O54962 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Banf1O54962 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
Banf1O54962 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Banf1O54962 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
Banf1O54962 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Banf1O54962 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Banf1O54962 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Banf1O54962 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
Banf1O54962 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC15.95■□□□□ 0.14
Banf1O54962 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Banf1O54962 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Banf1O54962 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Banf1O54962 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Banf1O54962 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Banf1O54962 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Banf1O54962 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC15.94■□□□□ 0.14
Banf1O54962 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Banf1O54962 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC15.94■□□□□ 0.14
Banf1O54962 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Banf1O54962 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
Banf1O54962 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC15.94■□□□□ 0.14
Banf1O54962 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Banf1O54962 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Banf1O54962 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Banf1O54962 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Banf1O54962 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Banf1O54962 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Banf1O54962 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
Banf1O54962 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
Banf1O54962 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
Banf1O54962 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC15.94■□□□□ 0.14
Banf1O54962 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 81 ms