Protein–RNA interactions for Protein: O35683

Ndufa1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, mousemouse

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndufa1O35683 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC11.28□□□□□ -0.6
Ndufa1O35683 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ndufa1O35683 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ndufa1O35683 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ndufa1O35683 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ndufa1O35683 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ndufa1O35683 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ndufa1O35683 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Ndufa1O35683 Gm38027-201ENSMUST00000192315 235 ntBASIC11.28□□□□□ -0.6
Ndufa1O35683 Arhgef33-211ENSMUST00000225658 473 ntBASIC11.28□□□□□ -0.6
Ndufa1O35683 AC156016.1-201ENSMUST00000227190 1035 ntBASIC11.28□□□□□ -0.6
Ndufa1O35683 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ndufa1O35683 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ndufa1O35683 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ndufa1O35683 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Ndufa1O35683 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ndufa1O35683 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Ndufa1O35683 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Ndufa1O35683 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ndufa1O35683 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ndufa1O35683 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ndufa1O35683 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ndufa1O35683 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ndufa1O35683 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Ndufa1O35683 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ndufa1O35683 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ndufa1O35683 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Ndufa1O35683 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Ndufa1O35683 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ndufa1O35683 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Ndufa1O35683 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ndufa1O35683 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.6
Ndufa1O35683 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.6
Ndufa1O35683 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Ndufa1O35683 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Ndufa1O35683 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Ndufa1O35683 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Ndufa1O35683 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ndufa1O35683 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Ndufa1O35683 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ndufa1O35683 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ndufa1O35683 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC11.27□□□□□ -0.61
Ndufa1O35683 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ndufa1O35683 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ndufa1O35683 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ndufa1O35683 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Ndufa1O35683 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ndufa1O35683 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC11.27□□□□□ -0.61
Ndufa1O35683 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ndufa1O35683 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ndufa1O35683 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ndufa1O35683 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ndufa1O35683 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Ndufa1O35683 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ndufa1O35683 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ndufa1O35683 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ndufa1O35683 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Ndufa1O35683 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ndufa1O35683 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Ndufa1O35683 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ndufa1O35683 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ndufa1O35683 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ndufa1O35683 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Ndufa1O35683 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Ndufa1O35683 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ndufa1O35683 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ndufa1O35683 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ndufa1O35683 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Ndufa1O35683 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ndufa1O35683 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ndufa1O35683 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ndufa1O35683 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ndufa1O35683 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Ndufa1O35683 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
Ndufa1O35683 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ndufa1O35683 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC11.26□□□□□ -0.61
Ndufa1O35683 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Ndufa1O35683 Gm7638-201ENSMUST00000121348 967 ntBASIC11.26□□□□□ -0.61
Ndufa1O35683 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ndufa1O35683 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ndufa1O35683 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC11.26□□□□□ -0.61
Ndufa1O35683 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Ndufa1O35683 AC175538.1-201ENSMUST00000225343 1269 ntBASIC11.26□□□□□ -0.61
Ndufa1O35683 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ndufa1O35683 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Ndufa1O35683 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ndufa1O35683 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ndufa1O35683 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ndufa1O35683 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ndufa1O35683 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ndufa1O35683 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ndufa1O35683 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Ndufa1O35683 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Ndufa1O35683 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ndufa1O35683 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ndufa1O35683 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ndufa1O35683 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC11.26□□□□□ -0.61
Ndufa1O35683 AC159649.2-201ENSMUST00000222984 3223 ntBASIC11.26□□□□□ -0.61
Ndufa1O35683 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ndufa1O35683 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms