Protein–RNA interactions for Protein: O35600

Abca4, Retinal-specific ATP-binding cassette transporter, mousemouse

Predictions only

Length 2,310 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca4O35600 Gm42693-201ENSMUST00000196779 631 ntBASIC14.63□□□□□ -0.07
Abca4O35600 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC14.63□□□□□ -0.07
Abca4O35600 Gm5035-201ENSMUST00000215581 927 ntBASIC14.63□□□□□ -0.07
Abca4O35600 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Abca4O35600 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Abca4O35600 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Abca4O35600 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Abca4O35600 Ldb3-207ENSMUST00000227819 1499 ntBASIC14.62□□□□□ -0.07
Abca4O35600 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Abca4O35600 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Abca4O35600 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Abca4O35600 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Abca4O35600 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Abca4O35600 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Abca4O35600 Gm38225-201ENSMUST00000194001 393 ntBASIC14.62□□□□□ -0.07
Abca4O35600 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Abca4O35600 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Abca4O35600 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Abca4O35600 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Abca4O35600 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Abca4O35600 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Abca4O35600 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Abca4O35600 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC14.62□□□□□ -0.07
Abca4O35600 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Abca4O35600 Gm5303-201ENSMUST00000117943 1252 ntBASIC14.61□□□□□ -0.07
Abca4O35600 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC14.61□□□□□ -0.07
Abca4O35600 Cd63-ps-201ENSMUST00000145417 875 ntBASIC14.61□□□□□ -0.07
Abca4O35600 Gm8116-201ENSMUST00000182917 1201 ntBASIC14.61□□□□□ -0.07
Abca4O35600 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC14.61□□□□□ -0.07
Abca4O35600 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Abca4O35600 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Abca4O35600 Gm10478-201ENSMUST00000084451 396 ntBASIC14.61□□□□□ -0.07
Abca4O35600 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Abca4O35600 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Abca4O35600 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Abca4O35600 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Abca4O35600 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Abca4O35600 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Abca4O35600 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Abca4O35600 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Abca4O35600 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Abca4O35600 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
Abca4O35600 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Abca4O35600 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC14.61□□□□□ -0.07
Abca4O35600 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Abca4O35600 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Abca4O35600 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Abca4O35600 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Abca4O35600 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Abca4O35600 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC14.61□□□□□ -0.07
Abca4O35600 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Abca4O35600 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Abca4O35600 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Abca4O35600 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Abca4O35600 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Abca4O35600 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Abca4O35600 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Abca4O35600 Gm27892-201ENSMUST00000185017 106 ntBASIC14.6□□□□□ -0.07
Abca4O35600 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Abca4O35600 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC14.6□□□□□ -0.07
Abca4O35600 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Abca4O35600 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Abca4O35600 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Abca4O35600 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC14.6□□□□□ -0.07
Abca4O35600 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Abca4O35600 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Abca4O35600 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Abca4O35600 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Abca4O35600 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Abca4O35600 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Abca4O35600 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC14.59□□□□□ -0.07
Abca4O35600 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Abca4O35600 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Abca4O35600 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Abca4O35600 Gm6627-201ENSMUST00000218299 2386 ntBASIC14.59□□□□□ -0.07
Abca4O35600 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Abca4O35600 Gm9002-201ENSMUST00000178437 499 ntBASIC14.59□□□□□ -0.07
Abca4O35600 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Abca4O35600 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Abca4O35600 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Abca4O35600 Gm42466-201ENSMUST00000202099 1301 ntBASIC14.59□□□□□ -0.07
Abca4O35600 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Abca4O35600 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Abca4O35600 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Abca4O35600 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Abca4O35600 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Abca4O35600 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Abca4O35600 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Abca4O35600 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC14.59□□□□□ -0.07
Abca4O35600 Gm4875-201ENSMUST00000118257 786 ntBASIC14.59□□□□□ -0.07
Abca4O35600 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
Abca4O35600 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Abca4O35600 Gm45195-201ENSMUST00000205597 1008 ntBASIC14.59□□□□□ -0.07
Abca4O35600 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC14.59□□□□□ -0.07
Abca4O35600 Gm8399-201ENSMUST00000082300 1117 ntBASIC14.59□□□□□ -0.07
Abca4O35600 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Abca4O35600 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Abca4O35600 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Abca4O35600 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC14.58□□□□□ -0.08
Abca4O35600 AC238811.1-201ENSMUST00000225302 441 ntBASIC14.58□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms