Protein–RNA interactions for Protein: O35454

Clcn6, Chloride transport protein 6, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn6O35454 4930554C24Rik-201ENSMUST00000187735 1084 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Clcn6O35454 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC16.94■□□□□ 0.3
Clcn6O35454 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC16.94■□□□□ 0.3
Clcn6O35454 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Clcn6O35454 Gm30025-201ENSMUST00000218555 728 ntBASIC16.94■□□□□ 0.3
Clcn6O35454 Il3ra-202ENSMUST00000223589 738 ntBASIC16.94■□□□□ 0.3
Clcn6O35454 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Clcn6O35454 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Clcn6O35454 Olfr1260-201ENSMUST00000061830 933 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Clcn6O35454 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Clcn6O35454 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Clcn6O35454 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Clcn6O35454 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC16.94■□□□□ 0.3
Clcn6O35454 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Clcn6O35454 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Clcn6O35454 Glrb-206ENSMUST00000194085 1341 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Clcn6O35454 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Clcn6O35454 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
Clcn6O35454 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Clcn6O35454 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Clcn6O35454 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Clcn6O35454 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Clcn6O35454 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Clcn6O35454 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC16.93■□□□□ 0.3
Clcn6O35454 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Clcn6O35454 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Clcn6O35454 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Clcn6O35454 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Clcn6O35454 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Clcn6O35454 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC16.93■□□□□ 0.3
Clcn6O35454 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Clcn6O35454 Clec12b-201ENSMUST00000032261 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Clcn6O35454 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Clcn6O35454 Prl8a8-202ENSMUST00000110350 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Clcn6O35454 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Clcn6O35454 Gm6938-201ENSMUST00000123014 771 ntTSL 3 BASIC16.93■□□□□ 0.3
Clcn6O35454 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Clcn6O35454 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Clcn6O35454 Gm28439-201ENSMUST00000187714 876 ntBASIC16.93■□□□□ 0.3
Clcn6O35454 AC120002.2-201ENSMUST00000220205 773 ntBASIC16.93■□□□□ 0.3
Clcn6O35454 Gm9987-201ENSMUST00000069768 567 ntBASIC16.93■□□□□ 0.3
Clcn6O35454 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Clcn6O35454 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Clcn6O35454 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Clcn6O35454 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Clcn6O35454 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Clcn6O35454 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC16.93■□□□□ 0.3
Clcn6O35454 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Clcn6O35454 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Clcn6O35454 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Clcn6O35454 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Clcn6O35454 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Clcn6O35454 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC16.93■□□□□ 0.3
Clcn6O35454 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Clcn6O35454 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Clcn6O35454 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Clcn6O35454 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Clcn6O35454 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Clcn6O35454 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Clcn6O35454 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Clcn6O35454 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Clcn6O35454 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Clcn6O35454 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Clcn6O35454 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Clcn6O35454 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Clcn6O35454 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Clcn6O35454 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Clcn6O35454 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Clcn6O35454 Arl6-203ENSMUST00000118438 875 ntTSL 3 BASIC16.92■□□□□ 0.3
Clcn6O35454 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC16.92■□□□□ 0.3
Clcn6O35454 Gm8988-201ENSMUST00000155015 1240 ntBASIC16.92■□□□□ 0.3
Clcn6O35454 1810022K09Rik-202ENSMUST00000185384 435 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Clcn6O35454 Gm18356-201ENSMUST00000185677 623 ntBASIC16.92■□□□□ 0.3
Clcn6O35454 Gm43799-201ENSMUST00000201845 579 ntBASIC16.92■□□□□ 0.3
Clcn6O35454 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC16.92■□□□□ 0.3
Clcn6O35454 Gm45701-201ENSMUST00000212049 235 ntBASIC16.92■□□□□ 0.3
Clcn6O35454 Olfr863-ps1-201ENSMUST00000213073 929 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Clcn6O35454 AC153899.1-201ENSMUST00000214092 1117 ntBASIC16.92■□□□□ 0.3
Clcn6O35454 AC107711.5-202ENSMUST00000226429 702 ntBASIC16.92■□□□□ 0.3
Clcn6O35454 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Clcn6O35454 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Clcn6O35454 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Clcn6O35454 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Clcn6O35454 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Clcn6O35454 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Clcn6O35454 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Clcn6O35454 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Clcn6O35454 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Clcn6O35454 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Clcn6O35454 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Clcn6O35454 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Clcn6O35454 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Clcn6O35454 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Clcn6O35454 A530046M15Rik-201ENSMUST00000221778 1538 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Clcn6O35454 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Clcn6O35454 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Clcn6O35454 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Clcn6O35454 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Clcn6O35454 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC16.91■□□□□ 0.3
Clcn6O35454 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms