Protein–RNA interactions for Protein: O35393

Efnb3, Ephrin-B3, mousemouse

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Efnb3O35393 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Efnb3O35393 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Efnb3O35393 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Efnb3O35393 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Efnb3O35393 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Efnb3O35393 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Efnb3O35393 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC12.42□□□□□ -0.42
Efnb3O35393 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC12.42□□□□□ -0.42
Efnb3O35393 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Efnb3O35393 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Efnb3O35393 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Efnb3O35393 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Efnb3O35393 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Efnb3O35393 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Efnb3O35393 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Efnb3O35393 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Efnb3O35393 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Efnb3O35393 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Efnb3O35393 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Efnb3O35393 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Efnb3O35393 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Efnb3O35393 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Efnb3O35393 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Efnb3O35393 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Efnb3O35393 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Efnb3O35393 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Efnb3O35393 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Efnb3O35393 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Efnb3O35393 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Efnb3O35393 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC12.41□□□□□ -0.42
Efnb3O35393 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
Efnb3O35393 Gm43352-201ENSMUST00000196419 3065 ntBASIC12.41□□□□□ -0.42
Efnb3O35393 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Efnb3O35393 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC12.41□□□□□ -0.42
Efnb3O35393 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Efnb3O35393 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Efnb3O35393 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Efnb3O35393 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Efnb3O35393 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Efnb3O35393 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Efnb3O35393 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Efnb3O35393 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Efnb3O35393 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Efnb3O35393 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Efnb3O35393 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Efnb3O35393 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Efnb3O35393 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC12.41□□□□□ -0.42
Efnb3O35393 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Efnb3O35393 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Efnb3O35393 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC12.4□□□□□ -0.42
Efnb3O35393 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Efnb3O35393 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Efnb3O35393 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Efnb3O35393 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Efnb3O35393 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Efnb3O35393 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Efnb3O35393 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Efnb3O35393 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Efnb3O35393 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Efnb3O35393 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Efnb3O35393 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Efnb3O35393 Gm13559-201ENSMUST00000120476 863 ntBASIC12.4□□□□□ -0.42
Efnb3O35393 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Efnb3O35393 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Efnb3O35393 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC12.4□□□□□ -0.42
Efnb3O35393 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC12.4□□□□□ -0.42
Efnb3O35393 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Efnb3O35393 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC12.4□□□□□ -0.42
Efnb3O35393 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC12.4□□□□□ -0.42
Efnb3O35393 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Efnb3O35393 Gm7370-201ENSMUST00000219471 767 ntBASIC12.4□□□□□ -0.42
Efnb3O35393 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Efnb3O35393 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Efnb3O35393 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Efnb3O35393 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Efnb3O35393 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Efnb3O35393 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Efnb3O35393 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC12.4□□□□□ -0.42
Efnb3O35393 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Efnb3O35393 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Efnb3O35393 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Efnb3O35393 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Efnb3O35393 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Efnb3O35393 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Efnb3O35393 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Efnb3O35393 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Efnb3O35393 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Efnb3O35393 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Efnb3O35393 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Efnb3O35393 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC12.39□□□□□ -0.43
Efnb3O35393 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Efnb3O35393 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC12.39□□□□□ -0.43
Efnb3O35393 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Efnb3O35393 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Efnb3O35393 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Efnb3O35393 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Efnb3O35393 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Efnb3O35393 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Efnb3O35393 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Efnb3O35393 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC12.39□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 54.2 ms