Protein–RNA interactions for Protein: O08848

Trove2, 60 kDa SS-A/Ro ribonucleoprotein, mousemouse

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trove2O08848 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Trove2O08848 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trove2O08848 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trove2O08848 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trove2O08848 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Trove2O08848 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trove2O08848 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trove2O08848 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trove2O08848 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trove2O08848 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trove2O08848 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trove2O08848 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trove2O08848 Gm8668-201ENSMUST00000120559 1447 ntBASIC16.11■□□□□ 0.17
Trove2O08848 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trove2O08848 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Trove2O08848 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trove2O08848 Gm37736-201ENSMUST00000193564 2802 ntBASIC16.1■□□□□ 0.17
Trove2O08848 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Trove2O08848 Actl10-202ENSMUST00000226583 1501 ntBASIC16.1■□□□□ 0.17
Trove2O08848 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trove2O08848 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trove2O08848 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
Trove2O08848 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trove2O08848 Phf7-203ENSMUST00000226565 1971 ntBASIC16.1■□□□□ 0.17
Trove2O08848 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC16.1■□□□□ 0.17
Trove2O08848 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trove2O08848 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trove2O08848 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC16.1■□□□□ 0.17
Trove2O08848 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trove2O08848 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Trove2O08848 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trove2O08848 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trove2O08848 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Trove2O08848 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC16.1■□□□□ 0.17
Trove2O08848 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trove2O08848 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trove2O08848 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trove2O08848 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trove2O08848 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Trove2O08848 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Trove2O08848 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Trove2O08848 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Trove2O08848 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trove2O08848 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC16.09■□□□□ 0.17
Trove2O08848 Gm6433-201ENSMUST00000118634 875 ntBASIC16.09■□□□□ 0.17
Trove2O08848 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trove2O08848 Gm18115-201ENSMUST00000221209 621 ntBASIC16.09■□□□□ 0.17
Trove2O08848 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trove2O08848 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
Trove2O08848 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Trove2O08848 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trove2O08848 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trove2O08848 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trove2O08848 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Trove2O08848 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trove2O08848 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trove2O08848 Gfra2-202ENSMUST00000227633 1480 ntBASIC16.09■□□□□ 0.17
Trove2O08848 Gm44729-201ENSMUST00000206759 2052 ntBASIC16.09■□□□□ 0.17
Trove2O08848 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Trove2O08848 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trove2O08848 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Trove2O08848 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Trove2O08848 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Trove2O08848 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC16.08■□□□□ 0.17
Trove2O08848 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Trove2O08848 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Trove2O08848 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Trove2O08848 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Trove2O08848 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC16.08■□□□□ 0.17
Trove2O08848 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Trove2O08848 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC16.08■□□□□ 0.16
Trove2O08848 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trove2O08848 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trove2O08848 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Trove2O08848 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
Trove2O08848 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trove2O08848 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trove2O08848 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trove2O08848 Mir1668-201ENSMUST00000184114 107 ntBASIC16.08■□□□□ 0.16
Trove2O08848 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC16.08■□□□□ 0.16
Trove2O08848 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC16.08■□□□□ 0.16
Trove2O08848 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC16.08■□□□□ 0.16
Trove2O08848 Gm43352-201ENSMUST00000196419 3065 ntBASIC16.08■□□□□ 0.16
Trove2O08848 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Trove2O08848 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Trove2O08848 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trove2O08848 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trove2O08848 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trove2O08848 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC16.08■□□□□ 0.16
Trove2O08848 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Trove2O08848 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trove2O08848 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trove2O08848 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trove2O08848 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trove2O08848 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trove2O08848 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Trove2O08848 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trove2O08848 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Trove2O08848 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trove2O08848 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 62.4 ms